Pseudomonas rhizosphaerae: LT40_05145
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Entry
LT40_05145 CDS
T03339
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT40_05145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_05145
Transporters [BR:
prh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LT40_05145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_29
AAA_16
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_23
ATP-synt_ab
TniB
nSTAND3
nSTAND1
AAA_19
MMR_HSR1
Mg_chelatase
DO-GTPase2
DUF87
T2SSE
PRK
Sigma54_activat
NACHT
NB-ARC
MobB
AAA_24
AAA_5
NTPase_1
AAA_7
Dynamin_N
AIG1
APS_kinase
DUF4813
TsaE
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIS16829
UniProt:
A0A089YMN1
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Position
complement(1122287..1123906)
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AA seq
539 aa
AA seq
DB search
MNPLIEVHNLGIAYRHGAQQTQAVTDVSFSLMQGETLAIVGESGSGKTTIANAILGLLPD
SAVVTAGRLLVAGQDLSQATERTKRQLRGRTIGLVPQDPMVSLNPTQRIGCQIAEALVLA
KGARYLGVDADVGELLAQVGLDNPQLRARQYPHELSGGMRQRVLIAIALAGNPRLIIADE
PTSALDVTVQRRILDHLEGLVRERGISLLIITHDLGVAADRADRVLVMKAGALVEQGTPH
QVLANPRQPYTRALIAAAPAFAEPRAPRPVAASGQTPLLALTAVSKHYRLPRVRGQADRF
QALADVSFQVCAGRTLGIVGESGSGKSTALRIALGLEKADSGRIEFAEQDVTDFGWRQFR
PLRRRMQLVQQNPFAALDPRLSIFDSIVEPLVSFGLAKGAELDRAARELIERVHLPTHFL
DRLPRELSGGQRQRVAIARALALQPDLVLLDEPVSALDVSVQRQILDLLDELQRELGIAY
VIVSHDLAVIANVADDVLVMRQGRIVDQGPTAQLFNQPSNTYTQALLDAVPGNRRRALA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgctcattgaagtgcacaacctgggcatcgcctaccgccacggcgcgcaacag
acccaggccgtgacggatgtgtcgttcagcctgatgcaaggcgagaccctggccatcgtc
ggtgaatccggctcgggcaagaccaccatcgccaacgccattcttggcttgctgccggac
agcgccgtggtgaccgccgggcgcctgttggtggctggtcaggacctgagccaggccacc
gaacggaccaaacgccagttgcgcggccgcaccatcggcctggtgccgcaagacccgatg
gtcagtctcaatccgacccagcgcatcggctgccagatcgccgaagcgctggtgctggcc
aaaggcgcgcgctacctaggggtggacgccgatgtcggcgaactgctggctcaggtgggt
ctggacaacccgcagctgcgcgctcggcaatacccccatgagttgtccggcggcatgcgc
caacgggtactgatcgccatcgccctggccggcaacccacgtttgatcatcgccgatgag
cccaccagcgccctggacgtcaccgtgcaacggcgcatcctcgaccatctcgaagggctg
gtacgcgagcgcggcatttccctgctgatcatcacgcacgacctaggcgtggctgccgac
cgagccgaccgcgtgctggtgatgaaggccggcgctttggtcgaacagggcacgccacac
caggtgctggccaacccgagacagccctatacccgcgcgctgatcgccgccgcgccggcg
ttcgccgagccccgcgcaccgcgcccggtggccgcctcggggcaaacacccctgctggcg
ctgacggcggtgagcaagcattaccgcctgccccgggtgcgcggccaggccgatcgcttc
caggcgctggccgatgtcagtttccaggtctgcgccggtcgcaccctgggcatcgtcggc
gaatcgggctcgggcaagagcacggcgctgcgcatcgccctgggattggaaaaagccgac
agcggacgcatcgaatttgccgaacaggacgtgaccgacttcggctggcgacaattcagg
ccactgcgccggcgcatgcaactggtgcagcagaaccccttcgcagcactggacccgcgc
ctgtcgattttcgacagcatcgtcgagccgctggtgtcgttcggcctggccaaaggtgcg
gagctggatcgggccgcgcgtgaattgatcgagcgagtgcacttgccgacgcactttctc
gaccgcctgcccagggaactgtccggcggtcagcgccagcgcgtggccatcgctcgggcg
ctggcgttgcagcccgatctggtactgctggacgagccggtatcagcgctggatgtttcg
gtgcagcggcagattctcgacctgctggacgaactgcaacgcgagctgggtatcgcctat
gtgatcgtttcgcacgatctggcggtgatcgccaacgtggccgatgacgtcttggtcatg
cgccagggtcgcatcgtcgatcaaggccccaccgctcaactgttcaaccagccgtcaaat
acctacacccaggcactgctcgacgcggtacccggcaatcgccggcgggccctagcatag
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