Pseudomonas rhizosphaerae: LT40_06590
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Entry
LT40_06590 CDS
T03339
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LT40_06590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prh03400
]
LT40_06590
Enzymes [BR:
prh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LT40_06590
DNA repair and recombination proteins [BR:
prh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LT40_06590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AIS17094
UniProt:
A0A089YNE2
LinkDB
All DBs
Position
complement(1443490..1444416)
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AA seq
308 aa
AA seq
DB search
MPSRHTDIELFYKPPFDWQRLLRFYGGRSSALVETVIDGVYLRTVEWLGDEGLLSVRQDA
SRDCLIARVDGPASAHLPALVPRLRRMFDLDLDPQKLHAALDGDPWLGRLLLQTPGLRVP
GTWSTFELIVRTIVGQQVSVKAATTIAGRLAERAGQPVSQPQHPQVAWQFPTPIALAEVD
LERIGMPGKRVAALQNFAAAVAHNQVQIEAFPDERTRTDLGPLRQGLLALPGIGPWTVEY
VAMRAWRDTDAWPGSDLVIMQEIIREHPELLKLGHQRLRSEDWRPWRAYAVMYIWNELMD
RTDGQRGG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgccctcacgccataccgacatcgaattgttctataaaccgcccttcgactggcaacgc
ctgctcaggttttacggcgggcgctccagtgcgttggtcgaaacggtcatcgacggcgtg
tacctgcgcaccgtcgaatggctgggcgacgaaggcttgctcagtgtccggcaggacgcg
agccgtgactgcctgatcgcacgcgtcgatgggccggccagtgctcacctgcctgcgctg
gtgccgcgtctgcggcgcatgttcgatctggatctggacccgcaaaagctgcatgccgca
ctcgacggcgacccttggctgggccgcctgctgctgcaaacacccgggctgcgcgtgccg
ggcacctggtcgaccttcgagctgatcgtgcgcaccatcgtcggccaacaggtcagcgtc
aaggcggcgacaaccatcgctggtcgcctggccgaacgtgccgggcagcctgtaagccag
ccacagcatccacaggtggcgtggcagttccctacccccattgccctggccgaagtcgac
ctcgaacggatcggcatgcccggcaagcgagtcgcagcactgcagaacttcgccgccgca
gtggcccacaaccaggtgcagatcgaggcgttccctgatgaacggacgcggaccgacctg
gggcccctgcgccaagggttgctggccctgccgggcattggcccatggacggtcgaatac
gtggccatgcgcgcctggcgggataccgatgcctggccgggcagcgatctggtgatcatg
caggagatcatccgcgagcaccctgagctgctgaaactggggcatcaacggctgcgcagc
gaggactggcggccgtggcgcgcctacgcagtcatgtacatctggaatgagctcatggac
cgcaccgacggccagcgcggtggctga
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