Pseudomonas rhizosphaerae: LT40_16285
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Entry
LT40_16285 CDS
T03339
Name
(GenBank) choline dehydrogenase
Organism
prh
Pseudomonas rhizosphaerae
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
Lycopene_cycl
DAO
NAD_binding_8
Pyr_redox_2
Thi4
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AIS18856
UniProt:
A0A089ZR68
LinkDB
All DBs
Position
complement(3623555..3625207)
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AA seq
550 aa
AA seq
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MPIVSSVYDYIVVGAGPAGCLLANRLSADPSVKVLLLEAGGQDNYAWIHIPVGYLFCIGN
PRTDWCFKTQPQPGLDGRSLNYPRGKVLGGCSSINGMIYMRGQSSDYDRWEALGNPGWGW
KDVLPLFRKSENHHAGTSEFHSADGEWRVEQQRYRWPILDAFREAAAESGIASIDDFNTG
DNQGCGYFQVNQKSGVRWNSAKAFLRPARTRANLTIHTGVRVDKVLLEEGRAHAVVARWQ
GEDHPFQARGEIILCAGAIGSPNILQRSGIGPRPLLERLGITVQHELPGVGGNLQDHLQL
RLVYKVSNARTLNQVANSLWGKFGMGVRYLYDRSGPLAMAPSQLGAFVRSSPEQPSPNLQ
YHVQPLSLERFGEPLHRFPAFTASVCNLRPKSRGRVDISSADPDSPPLIDPNYLSDPDDV
QVAVDAIRLTRKIVQGAALQGFAPQEYLPGVDVQSEEALRAAAGRIGTTIFHPAGTCRMG
NDTLAVVDAQLKVRGVQGLRVADASIMPEIVSGNTCSPTVMIAEKAAQMILDPQPLEAVP
VTSLQMPETI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccaatagtctcatccgtctacgactacatcgttgtcggcgccggccctgcaggttgc
ctgctcgccaatcgcctgtctgccgatccctcggtcaaggtgctgctgctcgaagccggt
ggccaggacaactatgcctggatccatattcctgtcgggtatctgttctgcatcggcaac
ccccgcaccgattggtgcttcaagacccagccccagccaggcctggatggccgcagcctg
aactatccgcgaggcaaggtcctgggtggctgctcgtcgatcaacggcatgatctacatg
cgtggccagtccagcgactacgatcgttgggaagccttaggcaatccgggctggggctgg
aaagacgtgctgccgctgtttcgcaagagcgaaaaccatcacgccggtacgtccgaattc
cacagtgccgacggcgagtggcgcgtggagcagcagcgttatcgctggccgattctcgac
gccttccgcgaggctgcggctgaatccgggattgccagcatcgacgacttcaacaccggg
gacaaccagggttgcggttacttccaggtcaatcagaaatccggggtgcgctggaattcg
gccaaggccttcctgcggccggcgcgcacacgagcgaacctgacgatccacacaggagta
cgagtggacaaggtgttgctggaagagggtcgtgcccacgccgtggttgctcgctggcag
ggtgaagatcacccgtttcaggcgcgcggtgagatcatcctgtgtgcaggggcgatcggc
tcgccgaacattctccagcgctctggaatcggcccgcggccattgctcgagcgcctgggc
atcacggtgcaacatgagctgcccggcgtgggcggcaacttgcaggaccacctgcaactg
cggctggtgtacaaggtcagcaatgcgcgcacgctcaaccaggtagccaacagcctgtgg
ggcaaattcggcatgggtgtgcgctacctgtacgaccgcagtgggccgttggccatggcg
cccagccagttgggagctttcgtgcgatcaagcccggagcagccctcccccaacctgcaa
tatcacgtgcagccgctgtcgctagagcgcttcggcgagccgctgcaccggttcccggca
ttcactgcttcggtgtgcaacctgcggccgaaaagtcggggacgggtcgatatcagctcg
gccgatcccgattcgccgccgctgatcgatcccaactacctcagcgatcccgacgacgtg
caggtggccgtggatgccattcgcctgactcgcaagatcgtccagggcgcagctctgcaa
ggcttcgcgccgcaggaatacctgccgggcgtggacgtgcagagtgaagaagcgctgcgc
gcagcggcaggacgcataggaacgactatctttcatccagcaggcacctgccgcatgggc
aacgacacgctcgcggtggtggatgcacaactcaaggtacgcggtgttcaaggcctgcgt
gtggcggacgcgtcgatcatgccggaaatcgtctcgggcaatacctgctcgccgaccgtg
atgatcgctgaaaaggcggcgcagatgattcttgacccgcagccgttggaggccgtaccg
gtgacatcgctgcagatgccggaaacgatttga
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integrated database retrieval system
