KEGG   Prodigiosinella aquatilis: PCO85_05315
Entry
PCO85_05315       CDS       T09220                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
prod  Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:prod00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:prod02044]
    PCO85_05315 (traD)
Secretion system [BR:prod02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   PCO85_05315 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind T4SS-DNA_transf DUF87
Other DBs
NCBI-ProteinID: WJV54850
LinkDB
Position
1132114..1134219
AA seq 701 aa
MSDRYVMESLLRPAVELYTAGTAWSATYICLTAPWAVALAPSVSWVTAAGFGVLALQRTR
QGLRILRYRRNIRQLPRYELSSRQIPVSQRYLFLGRGFQWTQKHTQRLLEARRPEAEYYV
QPSVIYRMARDLEKRLEYSLPWLCRLTQADTLLNPVRPLPPVGGSPVYHGVEPNEGDVLY
DLSERVGHTLVIGTTRVGKTRLAEVLVTQDIRRGDVTVMFDPKGDADLLKRMWAEARRSG
REHEFYVFHLGWPDISARYNAIGRFSRISEVASRVAGQLSGEGNSAAFREFAWRFVNIIT
RALVALGQRPDYSLILRYVTNIGELYETYVENMLASRAPHLLEQVENLLSSGMLKEKDLP
RNMQGQANALRVWAIEMTLSSDEGKKLWDPVLDGLRSAVRYDRTYFDKIVASLLPLLEKL
TTGKTAALLAPDYNDMDDKRPIFDWQEVIRKKGIVYVGLDALSDSEVASAVGNSMFADLV
SVAGHIYKFGLADETDAATPKKVPINLHCDEFNELMGDEFIPLINKGGGAGIQVTAYTQT
LSDIEARVGSRAKANQVVGNFNSLIMLRVRENSTAELLTKQLPEVDVYNKTLTSGVTDVS
RPGEGTDFNSNVQDQVTLARMPMITPADIINLPKGQAFALLEGGRLWKIRMPLPGSGNDL
LMPESISRIAEYMQQNYRTGETWWTGSTLPSDALAALSTEG
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgagcgatcgctatgtgatggaatccctactgcgtccagcggtggagctgtatacggcg
gggacggcctggagtgcgacctatatttgtctgacggccccctgggcggttgcgctggcc
ccttctgtcagttgggtcaccgctgccggctttggcgtgttggctcttcaacgtacccgg
caaggactgcgtatcctgcgttaccgtcgcaatatccggcagttgccccgctatgaattg
agtagccggcaaatccccgtcagccagcggtatttgttcctggggcgcggatttcagtgg
acgcaaaaacacacgcaacgcctgctcgaagcgcggcgtcctgaagcagaatattatgtt
cagccttcggttatctatcgtatggcccgggatctggaaaaacggctggagtacagcctg
ccgtggctgtgccgattgacccaggcggatacgttgctcaatccggtacgccctttaccg
ccggtgggcggtagtcctgtctatcatggcgtggagccaaacgaaggcgacgtgttatat
gatctgagcgaacgggtgggacacacactggttatcggtaccacccgagtgggtaagact
cgcctggcggaggtgctggtcacgcaggatattcgtcgtggcgatgtcacggtgatgttc
gatcccaaaggcgatgccgatttgctcaaacgcatgtgggcagaggcccgacggtcgggc
agggaacacgagttttacgtctttcatctgggctggcctgacatcagtgcgcgctataac
gccattggccgcttcagccgcatctctgaggtggcctcccgcgtcgcgggacaactgtct
ggtgaaggtaattcggcagcgtttcgtgaattcgcctggcgttttgtgaacatcattacc
cgggcgctggtcgcgctcggacaacgtcctgattacagtctgatcttgcgctatgtgacc
aacattggcgagctctatgaaacctacgttgagaacatgctggcgtcccgggcgcctcat
cttctggagcaggtggaaaacctgttgtcatccggcatgctcaaagaaaaggacttgccg
cgcaatatgcagggtcaggccaatgcgctgagagtgtgggccattgaaatgacgctgagt
tctgatgaagggaaaaagctgtgggatccggtgctggacggcctgcgtagtgccgtccgc
tatgaccgcacctattttgacaaaatcgtggcttccctgttgcctctgctggagaagctg
actaccggcaaaaccgccgcgcttctggccccggattacaatgatatggacgacaaacgc
cccatctttgactggcaggaggtgatccgcaagaaaggcattgtctatgttggcctcgat
gcgctgtccgactccgaggtggcctctgccgttggcaacagcatgtttgccgatctggtc
tctgtcgccggccatatctataaatttggccttgctgatgaaaccgacgcggcgacgcca
aagaaagtgccgattaacctgcactgtgacgagttcaatgagctgatgggggatgagttc
atcccgcttattaacaaggggggcggcgccggtatccaggtgacggcgtatacgcagacc
ctgtctgatatcgaggcacgggtgggcagccgggcgaaagccaatcaggtggtgggtaat
ttcaactcgctgattatgctgagggtgcgtgaaaacagcacagcagaattgctgaccaaa
cagttacccgaagtggacgtctacaacaaaaccctgacgtctggcgtgaccgacgtttct
cggccgggagaaggaacggattttaacagtaacgtgcaggatcaggtgacgctggccaga
atgccgatgataacgccggcagatattatcaacctgcccaaaggccaggcatttgctttg
cttgagggcggacgcctgtggaaaatccggatgccgctgccgggaagcggtaacgaccta
cttatgccggaaagtatcagccgcatcgcagagtacatgcagcagaattatcgcaccggt
gagacctggtggacgggcagcacattgccttctgatgccctggcggcattatccacggag
ggataa

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