Propionimicrobium sp. PCR01-08-3: QQ658_00755 Help Entry QQ658_00755       CDS       T09133                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism prop  Propionimicrobium sp. PCR01-08-3 Pathway prop03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:prop00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     QQ658_00755  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:prop03400]     QQ658_00755 Enzymes [BR:prop01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      QQ658_00755 DNA repair and recombination proteins [BR:prop03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      QQ658_00755 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S Motif Other DBs NCBI-ProteinID:  WIY82926 UniProt:  A0A9Y2RWL8 LinkDB All DBs Position complement(151174..153891) Genome browser AA seq 905 aa AA seqDB search MATKRQTIEVGGLKLAVSNLDKVMYPETGTTKGDVLDYYLQIAPVLVPQAAWRPATRKRW VNGVGTADDPGEVFFRKDLEDGTPGWVPTGKIVHKERTNVYPLANNAAVLAWFAQLAALE VHVPQWRFGSDGAPRNPDRLVLDLDPGEGAGLKECVAVAHMIRDILTDMKLDAVPVTSGS KGIHLYAPLDGRTTSDQVAAVAKQLAESLEKEAPKQVIAIQKRAERAGKVLVDWSQNNAA KTTVCPYSLRGRMRPTVACPRTWDELDDPKLAQLDYREVLKRVADGLDPIADQGWPFDQA PEAPKKSRSADSGTTDKLTRYREKRDANLTPEPVPEASGKSTGGKSKARETHKQGTSSTS KQEDSADSSSGNVPTDDAGDEALTFVIQEHHARRLHWDFRLEHDGVLASWAVPKGPPLSS DEHRLAVQVEDHPLDYGSFEGVIPKGQYGGGTVTIWDAGTIEVEKWRSDEIIVVLHGRKT GGLGGLPRRYVLVRTSGGGEKAQWLLIFKKDQPAAAQSRVGKGEDGSDRHMGQRGSGHKA DDSPPDSAHGDGLREGDDKSKKSEPDDAKVVSDLGKEPELELPDEAPAPMLATLGSPDDL DDGQDWALEMKWDGVRAICLVAGNRVRLVSRNGNDVTERYPELAELASALNADAAILDGE IVALDQDGRPDFELLQPRMHLDGRRAARLARENPVTLMLFDVLSLTVEGSERRLMRTGYR QRRELLEAAVEPTERIRVPSQFDGSLPKALEHAKAERLEGVMAKRQDSVYVPGRRSRQWI KIKHRRDQSAVIVGWRVDAEDRLRSLLLAVPDDDGTLHYAGRVGSGISPNQIHDLEQKLQ PIERKTPPLGDVPAADRHDARWVRPSLVGEVAYAEVTHEGKLRSPVWRGWRDDVIPDDVR WEKTR NT seq 2718 nt NT seq  +upstreamnt  +downstreamnt atggccaccaagcgacaaacgatcgaagtcggaggcttgaagctcgcggtatccaacctt gacaaggtgatgtacccagaaaccggcaccaccaagggtgacgtgctcgactactacctg cagatcgcgccggtgctggtgccgcaggcggcctggcgtccggcgacccgtaaacggtgg gtgaacggcgtcggcaccgcagacgatccgggcgaggtcttcttccgcaaagacttggaa gatggtacgcccggctgggttccgaccggaaagatcgtccacaaagagcggacgaatgtg tatccgctggccaataacgccgcggtgctcgcctggttcgcccagctggccgcactcgag gtccacgtgccgcaatggcggttcggctccgatggagcaccccgtaatccggatagattg gtcctggatctcgaccccggcgagggcgccgggctgaaggagtgcgtcgccgtagcacat atgatccgcgacattctgaccgatatgaagctggacgcggtgccggtgacatcgggttcg aagggcattcatttgtatgccccgctcgacggccggacgaccagcgatcaggtcgccgcg gtggccaagcagctcgccgagtcactggaaaaggaagcgcccaagcaggtcatcgcaatc cagaagcgggccgagcgcgcgggcaaggtgctggtcgactggtcgcagaacaatgcggcg aagacgacggtctgtccgtattcactgcgcggacgcatgcgtccgaccgttgcctgcccc agaacctgggacgaactcgatgacccgaagctcgcccagttggactatcgcgaggtgctg aaacgggtcgccgatggcctcgacccgattgccgaccagggctggccctttgatcaggca cccgaggcgcccaagaagtcgcgctccgcggattcggggacgaccgacaagttgacccgc tatcgcgagaagcgcgatgccaatctgacgcccgaaccggtgccggaggcctcgggcaag agcacgggcggcaagagcaaagccagggaaacccacaagcaaggtacatccagcacctct aagcaagaggattccgccgactcctcctccggcaacgtcccgaccgacgacgcaggcgac gaggcgttgaccttcgtcattcaggagcaccatgcccgccggctgcactgggatttccgg ctcgaacacgatggcgtccttgcgtcgtgggcggtgccgaagggccctccattgtcgagc gacgagcaccggctcgccgtgcaggtcgaggatcacccgcttgactacggcagtttcgag ggcgtgattccgaaaggccagtacggcggcggcacggtcacgatctgggacgccggcacc atcgaggtcgagaaatggcgttccgatgagatcatcgtggtcctgcatggacgcaaaaca ggtgggctcggtggtctcccccgtcgctacgtgctggtgcgcaccagcggcgggggcgag aaggcgcagtggttgctgatattcaagaaggatcagccagctgccgcccaatcgagggtc ggcaagggagaagacgggtctgatcggcacatgggtcagcgtggctctggacacaaagcg gatgattcaccgccggactccgcgcatggcgacggcttgcgcgagggtgacgacaaaagc aagaagagcgaacccgacgacgcaaaagtcgtatcggatttgggtaaagagcccgagctc gaactccccgatgaggccccggccccaatgcttgccactcttggttcgccggacgacttg gacgacggccaagactgggcgctggagatgaagtgggacggcgtacgcgcgatctgcctg gtcgcgggcaaccgcgtccgcttggtttcgcgcaatggcaacgacgtcaccgagcgctat cccgagctcgccgagttggcatcagcgttgaacgccgacgctgcgattctggacggcgag atcgtcgctctggaccaggacggtcgtccggacttcgagttgctgcagccccgcatgcac ttggacggacggcgtgcagcccgcttggcccgcgagaatcccgtgactctgatgctcttt gacgttctttcgctgaccgtcgaaggatcggagcggcggctgatgcgcaccggctaccgc caacgtcgcgaactgcttgaagccgcggttgaaccgaccgagcgaatccgggtgccgtcg cagttcgatggctcgttgcccaaggccttggagcatgcaaaggccgagcggttggaaggc gtgatggccaaacggcaggactcggtctacgtacccggacgcaggtcgcggcagtggatc aagatcaagcatcgtcgcgaccagtcagcggtcatcgtcggctggcgggtggacgccgaa gaccggctccgctcgctcctgcttgccgtgcccgacgacgatgggacgctgcactatgcc ggacgcgtcggctctggcatctcccctaatcagatacatgatcttgagcagaagctgcaa cctatcgagcggaagactcctccgttgggcgacgtgccggccgcagatcggcatgacgct cgttgggtgaggccgagcctggtgggcgaggtcgcctacgccgaggtcacccatgaaggc aaactgagatcaccggtgtggcgcggttggcgtgacgatgtcatcccggacgatgtccgc tgggagaaaacccggtga

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