Pseudoalteromonas rubra: AT705_00460
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Entry
AT705_00460 CDS
T04179
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
prr
Pseudoalteromonas rubra
Pathway
prr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AT705_00460 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_00460 (uvrC)
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AT705_00460 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH
HHH_5
HHH_2
HHH_3
GIY_YIG_2
PsbU
Motif
Other DBs
NCBI-ProteinID:
ALU41531
UniProt:
A0A0U3GEK9
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Position
1:98661..100484
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AA seq
607 aa
AA seq
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MAVFDSQAFLRTLTTEPGVYRMYDEDHQVIYVGKAKNLKKRVSSYFRSNIPDAKTRVLVS
NIRHIEVTLTNTETEALLLENNLIKKYQPRYNILLRDDKSYPYILLTDHRHPRLAFHRGS
RKKKGEYFGPFPSSAAVSESLRLMQKIFPVRQCEDAYYRARSRPCLQHQLKRCSAPCVAK
VSDDDYAEQVDMVRQFLSGKSHQVIATLVGKMEQASMALNFEAAAKYRDQIALLRQMQEQ
QSVAGNFAEMDVIGFAELNGLCAVHMLMIREHKVLGSKTFFPKIPKDSGREEILTSFVGQ
YYVSTGSHGRIAKDIVLPFEIAELDDLAAALTQVAERKVQLRVNVRAERAQYLELANKNA
LNSIMVKQNAQDSIDKRYARLKAALGLSDINRMECFDISHTMGENTVASCVVFDGQGPNN
REYRRYNVTGITPGDDYAAMAFALNKRYGKVTDPDKVPDIIFIDGGKGQLSRAESFFESW
TLDKLPMLIGVAKGTSRKPGLETLLIDGGRKTINLESDSPALHLIQHIRDESHRFAIAGH
RSKRQKQRTQSVLEEIEGVGLKRRQALLKYLGGMQGVKAANIQQLKQVPGISPQLAEKIF
NHLHDKA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtttgatagtcaggcgtttctcagaacgctgaccacggaacctggtgtgtat
cgtatgtatgacgaagaccaccaggttatttatgtcggtaaagctaaaaacctcaaaaag
cgcgtcagcagctactttcgcagcaatattccagatgccaagacccgggtccttgtgagt
aatattcgtcatatcgaagtgaccttgacgaatacagagaccgaagcgttattactggaa
aataacctgatcaaaaaatatcagcccaggtacaatattctcctgcgtgatgacaaatca
tatccttatattttactgaccgatcatcgtcaccccaggctagcctttcatcgtggttcc
agaaagaaaaaaggcgagtactttggcccatttcccagcagtgccgcagtatccgaaagc
ttgcgtctgatgcagaagatttttcccgtcagacaatgtgaagatgcttactaccgggcg
cgcagtcgtccttgtttacaacatcaactaaagcggtgttccgcaccttgcgtagcaaaa
gtcagcgatgatgactacgctgagcaggttgatatggtgcgccagtttcttagcggtaag
tcacaccaggtgattgccactttggtcggtaaaatggagcaggcgagcatggcactcaac
tttgaagcggcggctaagtatcgggatcaaattgcattgctacggcaaatgcaggagcag
cagtccgtggccggtaattttgccgaaatggatgtgataggttttgcagaactaaatggc
ttgtgtgcggttcatatgctcatgatccgggagcacaaagtgttggggtccaaaacgttt
ttccctaaaataccaaaagactcaggccgtgaggaaattctgaccagttttgtcggccag
tattacgtgtctacgggtagtcatggtcggattgccaaagatatagtgctgccctttgag
attgctgagttagacgatttggcagcagcgctcacccaggttgccgaacgtaaagtacaa
ttacgggtaaacgttcgagcagagcgggcacaatatctggagctggccaataagaatgcg
ctcaatagcattatggtcaagcaaaatgcacaggattctatcgacaaacggtatgccaga
ttaaaagctgcgcttggcctgtctgatatcaatcgtatggaatgttttgatatcagtcat
accatgggcgaaaacaccgtggcatcctgtgtggtatttgacggtcaggggcctaataat
cgtgaatatcgtcgctataatgtgaccggaattacgccgggagacgactatgcggccatg
gcgtttgcactgaataagcgctacggcaaagtcactgatcccgataaagtgcctgatatt
attttcattgatggtggtaaaggccagttatccagagcagaatctttctttgaatcctgg
acgctggataagttacctatgctgattggtgtggcgaagggcactagccgtaagcctggt
ttggaaactttgctcattgatggtgggcgtaaaaccattaatctggaaagcgactcacca
gcattgcatctgatccagcatatccgcgacgaatctcatcgttttgccattgcggggcac
agaagcaagcgccagaaacaacgtactcaatcggttctggaagaaatagaaggcgttggc
ctgaagcgacgccaggcactactcaaataccttggaggaatgcaaggcgtaaaagccgcc
aatatacaacaactaaaacaagtgcccgggatcagccctcagctggctgaaaagatattt
aaccatttgcatgacaaagcttaa
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