Pseudoalteromonas rubra: AT705_21730
Help
Entry
AT705_21730 CDS
T04179
Name
(GenBank) diguanylate phosphodiesterase
Organism
prr
Pseudoalteromonas rubra
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
ALU45561
UniProt:
A0A0U3HVM0
LinkDB
All DBs
Position
2:complement(598313..600226)
Genome browser
AA seq
637 aa
AA seq
DB search
MQSVFKNIATCIVCFVVIGIVISLLFTKHVVDIQTGRTTMPVSNQPTNSQSEHTPWYAFL
FAEQRFLLVKDEAHVLLKHDQSTFTSAPVKQVMKRVLSSPVLLLLVMGMLLLTLNKLREL
RQQHARAKALTDINQDLKDIISGLEIDYKALPIGGSVAQISHAVHTIASNIQRIKIKTDS
HVFQDKLTKLIDRHAYIEHISNELAMAEQQQSKCGLLFIDLDGFKQVNDSFGHSFGDEIL
IQVAERLCQVVRQYQLQALHAVHGLDQNLSRLGGDEFSIFIPELKDTGFCTEVAQTILGE
IERDFVLGNKLVKISASIGIAVYPDSAATPNALLQMSDVAMYRAKTDGRGIFRVYSPEMG
NKIRRYHYLLEELRLAIASQNFHLSFQPIVHVEDCSIDYFEALARWHHPIEGLIPPSEFI
PIAEESNLILDLGDWILLESCRQMSAWHNAGMKRVRISVNVSGIQLKHRAIFDWVMAALE
KTGLPPTSLMLEITESTLITASNEIIAQLERCRSAGVTIAIDDFGTGFSSLSTLADLPID
VIKIDKLFISQAKDNPKYYKILNSISELGAQLDLKIVAEGVEQVEQFELVKQMGIRCVQG
YLVSRPETSSRVGNKVLKSNMNHIASTGTSVWLPESS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtgtttttaaaaatatagcaacctgtattgtctgttttgttgtgattggcatt
gttattagcttgctgtttacaaaacatgtggtcgacatccagactggtcgcaccactatg
ccggtatctaatcaacccaccaactcccagtcagaacataccccctggtatgctttcctg
tttgctgaacaacgatttttgttagtaaaagacgaagcacatgtattgctgaagcacgat
caatcaacattcacctcagctcccgtaaaacaggtcatgaagcgtgtactttcttcgcca
gtcttgttgctacttgttatgggaatgctgctcttaacgctgaacaaactacgggaatta
aggcaacaacatgcccgagctaaagcgcttaccgatattaaccaggatctcaaagacatc
attagtggccttgagattgattacaaagccttgccgatcggtggctctgttgctcaaatc
agccatgcagttcataccattgcaagcaatattcaacgtatcaaaattaaaaccgacagc
catgtctttcaggacaaactaacaaaactgatagaccgccatgcctatatcgaacacatc
agtaacgagttggctatggcagaacaacagcaaagtaaatgtggcctgctatttatcgac
ctggatggttttaagcaagttaatgattcgttcggacacagttttggcgacgagatactg
atccaggttgccgagcgtttatgccaggtcgtacgccaataccaattacaggcgctgcat
gccgtgcatgggctcgatcaaaacctgtccagactcggcggcgatgagttttctatcttt
atcccggaactcaaagacacaggcttttgtactgaagtagctcaaaccatacttggggaa
attgaacgcgattttgtccttggcaataaactggtaaaaatcagcgccagtatcggtatt
gccgtatacccagacagtgcagcgacaccgaatgcactactacaaatgtctgatgtcgct
atgtaccgagccaaaacggatggccggggaattttccgcgtttactccccggaaatgggc
aacaaaattcgtcgctaccactacctgctggaagaattacgtttggcaattgcttctcag
aattttcatttgtcgtttcagccaattgtgcatgttgaagattgctccattgactacttt
gaagcactcgccagatggcaccaccctattgaaggcctgatcccaccgtctgagtttatt
cccattgcggaagagtccaacctgattttggatttgggtgattggatcctgcttgagtct
tgtagacaaatgtctgcctggcacaatgccggcatgaagcgagtaagaatttcagttaac
gtctctggtatccaactcaagcaccgcgctatttttgactgggtaatggccgcgttagaa
aaaacaggcttaccacccacttcactaatgcttgaaatcaccgagtcaacactcataacc
gccagtaatgaaatcattgctcagctcgagcgttgccgctctgccggtgtaactattgct
atcgatgactttggtaccgggtttagttcactcagtacgcttgccgatctacccatagac
gtcattaaaattgataaactgtttatttcacaggccaaggacaacccgaaatactacaag
atcctcaattcaatcagcgaactgggtgcacaacttgaccttaaaattgtggcagaaggt
gttgaacaggtcgaacagtttgaattggtcaagcaaatggggatacgctgcgtacaaggc
tatctggtcagccgcccggaaacctccagccgcgtaggcaataaagtactgaaaagcaat
atgaaccacattgcatccaccggtaccagtgtgtggctgccagagtccagctaa
DBGET
integrated database retrieval system
