Xylanibacter ruminicola: PRU_0197
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Entry
PRU_0197 CDS
T01212
Name
(GenBank) cytidine/deoxycytidylate deaminase zinc-binding domain protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru00240
Pyrimidine metabolism
pru01100
Metabolic pathways
pru01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PRU_0197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pru02044
]
PRU_0197
Enzymes [BR:
pru01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
PRU_0197
Secretion system [BR:
pru02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
PRU_0197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC_N
SNAD4
APOBEC3
APOBEC4_like
APOBEC2
NAD1
APOBEC1
XOO_2897-deam
NAD2
Motif
Other DBs
NCBI-ProteinID:
ADE83529
UniProt:
D5EW34
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All DBs
Position
237715..238152
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AA seq
145 aa
AA seq
DB search
MESKNDKQSKLDVRYLRMARIWAENSYCKRRQVGALVVKDKMIISDGYNGTPSGFENVCE
DDDNVTKPYVLHAEANAITKLARSNNNSDGATIYITASPCIECAKLIIQAGIKRVVYGEK
YRLTDGIELLERAGIEVIYIGLEDK
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaaaaaacgacaagcaaagtaaacttgacgtacgctatctgcgtatggcacgt
atttgggctgagaactcctactgcaagcgccgtcaggttggtgcgctggtggtaaaggat
aagatgattatcagcgatggttacaacggcactcccagcggctttgagaacgtgtgtgag
gacgacgacaacgtaaccaagccttacgtgctgcatgccgaggccaatgccattactaaa
ctggcgcgtagcaataacaacagcgatggcgccaccatctacattaccgcttcgccatgc
atcgagtgtgccaagcttatcatccaggctggtatcaagcgtgtggtttatggcgagaaa
taccgcctcaccgatggcatcgagctgcttgagcgtgctggcatcgaggttatctatatt
ggattagaagataaataa
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