Psychrobacter sp. PRwf-1: PsycPRwf_2133
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Entry
PsycPRwf_2133 CDS
T00541
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PsycPRwf_2133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prw03019
]
PsycPRwf_2133
Enzymes [BR:
prw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PsycPRwf_2133
Messenger RNA biogenesis [BR:
prw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PsycPRwf_2133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ABQ95073
UniProt:
A5WHD2
LinkDB
All DBs
Position
complement(2656681..2658840)
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AA seq
719 aa
AA seq
DB search
MAERSAKQLGLSKADLPNSIIEVIATLNKGGFDAYIVGGGVRDTLLGLSPKDFDAVTDAR
PHEVKDLFGKRCRIIGRRFQLAHVYSGRDMIEVATFRAPPTGDAHATSDGMIVRDNVWGD
IEQDFARRDFSINAMYYQPLKGVVHDFCNALDDIKNKTLRLLGHAPLRIEEDPVRLLRAL
RFKAKLGFEFDEELSNQFHDDNWALLDQVSPHRLYDESQKMFTGGYLVPLLPLLFEYGAI
RHLIIYPPQAPTRLVNQVAINTDKRIALGKSINPAFFYAALLWENYLHQLAKFKKKNMPF
HDAQLQAASKVIDRQRVKTAIPRFAEQFIRDIWVMQPKLANPRVKQIPQLAEHPRFRAAF
DFLLLREQCDDELNPLSESTNGMGEWWQTYQTLSEKQKQQAIDNFAGDARRGSGKSGRNR
SRNRNRIEEQNPIDAQANTEATNSYKPKVPKHKAALDSKPKDAAQDDRYVEERAQLEKLS
LGNLVGEQSPKHNQPSPLFTINAEKMAKQVPQQPGIEAQAELQATSVQNEVESKAAGRTE
TASKPAKAKNSQKQEPQKQEAKLDQATAAQATVQVQSQAVLLPKSEPVPAKRRRRLPSQE
MSQSEQAQAKLATAQPSSTKADVTPAANNAASADAKSAKAKKPANNSKAAETLVEVPANS
ETRVDSETRKAKPEVAKKRSKPAATLDVNSLIAKSERVPATRRRRQPSSMLSVSETSQS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgttcagccaagcagttagggttaagtaaggcggatttacccaattcgatt
attgaagtgattgccactttaaacaagggtggttttgatgcctatattgtcggtggcggg
gttcgcgatacacttttgggcttaagtccaaaggattttgatgccgtaactgatgccaga
ccgcatgaagtaaaagacttatttggcaaacgttgccgtattatcggtcgccgctttcaa
ttggcgcatgtgtattctggccgtgacatgattgaagtggctacttttcgagcgccacca
acgggagatgcgcatgccaccagtgatggcatgattgtgcgtgataacgtctggggcgat
attgagcaagattttgcgcgccgtgatttttctatcaatgccatgtactatcagccttta
aaaggcgtggtacatgatttttgtaatgccttagacgacatcaaaaataagaccctaaga
ttattaggtcatgcgcctttgcgtattgaagaagaccccgttcgtctgctacgtgcctta
cgttttaaagcaaagttgggttttgagtttgatgaagagctgtccaatcagtttcatgat
gacaattgggcgctgttagatcaagtgtctccgcaccgtctgtatgatgaatcacaaaaa
atgtttaccggcggctatttggtccctttattgcccttattatttgaatatggtgccatt
cgtcatttgattatttatccaccacaagcgcccacgcgattggttaatcaagtggccatt
aataccgataagcgtattgctctgggcaaaagtattaatccagcattcttctatgccgct
ttgttgtgggaaaattatttgcatcaattggctaagtttaaaaagaaaaacatgcctttt
catgatgcacaattgcaagcagcaagtaaggtcattgaccgtcaacgggtaaaaacagcc
attcctcgttttgctgagcaatttattcgtgatatctgggttatgcagcccaagcttgcc
aatcctagagtaaagcagatcccacagttggccgagcaccctcgttttcgcgctgcgttc
gactttttattattgcgtgagcagtgtgatgatgagctcaatcctttatctgagtcgacc
aatggcatgggtgagtggtggcaaacttatcagaccctatctgaaaaacaaaagcagcaa
gccattgataactttgcaggtgatgcgcgccgtggcagcggtaagtcaggtcgcaatcgt
agccgtaatagaaatcgcatcgaggagcaaaacccaatagacgcacaagccaatactgag
gccaccaatagctataagccaaaagtgcccaaacacaaggcagcgcttgattctaagcca
aaagacgctgctcaagatgatcgctatgtagaagaaagagcccagcttgagaagctgtca
ttaggtaacttagtgggtgagcagtcacccaagcacaatcagccaagcccactatttact
attaatgctgaaaaaatggccaaacaagtgccgcagcagccaggtattgaggcgcaggca
gagttacaggctaccagcgtacaaaatgaggtagaaagtaaagcagcaggtcgcaccgag
actgcctctaaacctgctaaagctaagaattctcaaaagcaggagcctcagaagcaggaa
gctaagctagatcaggcaactgctgcacaggctaccgttcaagttcagtcacaggccgtt
ctattgcctaagtctgaaccagtacctgccaagcgccgtcgtcgtctacccagtcaagag
atgagccagtctgaacaagcgcaggctaagctcgctaccgctcagccgtcatccactaaa
gccgacgtaacaccagctgctaacaacgccgcttctgccgacgctaagtctgccaaagca
aaaaagcctgccaataacagtaaagctgctgagacattagttgaggtccccgctaatagc
gaaacgagagttgatagcgaaaccagaaaggctaagccggaagtagcaaaaaaacggtca
aagccggcagcaacccttgatgtgaatagtctaattgcaaaaagtgagcgggttcctgcc
acacgtcgtcgtcgtcaaccaagctcgatgcttagtgtgagcgaaacaagtcagtcgtaa
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