Pseudomonas rhodesiae: HRH33_08420
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Entry
HRH33_08420 CDS
T07097
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx00071
Fatty acid degradation
prx00280
Valine, leucine and isoleucine degradation
prx00310
Lysine degradation
prx00362
Benzoate degradation
prx00380
Tryptophan metabolism
prx00410
beta-Alanine metabolism
prx00640
Propanoate metabolism
prx00650
Butanoate metabolism
prx00907
Pinene, camphor and geraniol degradation
prx00930
Caprolactam degradation
prx01100
Metabolic pathways
prx01110
Biosynthesis of secondary metabolites
prx01120
Microbial metabolism in diverse environments
prx01200
Carbon metabolism
prx01212
Fatty acid metabolism
Module
prx_M00087
beta-Oxidation
prx_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HRH33_08420 (fadB)
00650 Butanoate metabolism
HRH33_08420 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HRH33_08420 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HRH33_08420 (fadB)
00310 Lysine degradation
HRH33_08420 (fadB)
00380 Tryptophan metabolism
HRH33_08420 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HRH33_08420 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HRH33_08420 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HRH33_08420 (fadB)
00930 Caprolactam degradation
HRH33_08420 (fadB)
Enzymes [BR:
prx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HRH33_08420 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HRH33_08420 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HRH33_08420 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HRH33_08420 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QKJ72599
LinkDB
All DBs
Position
1863264..1865411
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDAL
KVGAVDAVVAPEKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIASDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
EGTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEHAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYDAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPIVYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYAELGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaagcagatgcttcggtcaagggcgtgatcgtctccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtcccgaccgttgccgcgatcaatggcatcgccctcggcggtggtctggaa
atgtgcctggccgctgacttccgcgtgatgtcggccaccgcaaaaatcggtctgccggaa
gtgaaactgggcatctacccaggcttcggcggcaccgtgcgtttgccgcgcctgatcggt
gcggacaacgccatcgagtggatcgccgccggtaaggaaaacaaagccgaagacgccctg
aaagtcggcgctgtcgacgcagtggttgccccggaaaaactggccgaggccgcgctgaac
ctgatcaaaggtgccatcagcggcgagttcgactacaaggccaagcgtcagcccaagctg
gaaaagctcaagctcaacgccatcgaacaaatgatgtcgttcgaaaccgccaaaggtttc
gtggctggccaggccggcccgaactacccggcaccggttgaagcgatcaagaccatccag
aaagccgccaacttcggtcgcgacaaagccctggaagtggaagcggccggtttcgtcaaa
ctggcgaaaacctcggcggcccagagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgatgaaatcgccagcgacgtgaaacaggctgccgtactc
ggcgccggtatcatgggcggcggcatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacggtatcgagcagggtctggcggaagccgccaaactg
ctggtaggtcgtgtggataaaggtcgcatgaccgcagcgaaaatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggcgatttcggtcacgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaggccgtgttggctgaagtggaagcgcaggtcaag
gaaggcaccattctggcgtccaacacctcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtacatatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaacatgccgtggccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggtttcctggtc
aaccgcgtgctgttcccttacttcggtggtttcgccaagttggtcagcgccggcgtggac
ttcgtgcgcatcgacaaagtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccatggccgcgatgtgatggctgaaggcttc
ccggaccgcatgaaagacgaccgccgttcggctgtcgacgccctgtacgacgctaagcgc
ctgggccagaaaaacggtaagggcttctacgcctacgaggcggacaagaaaggcaagcag
aagaaagtggccgatccgtcggtgcacgaagtgctggcaccgattgtgtacgagcagcgt
gaagtgtccgacgaggacatcatcaactggatgatgatcgccctgtgcctggaaaccgta
cgttgcctggaagatggcatcgtcgagaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgactcgataggtgtg
gccgagttcgttgccctggctgatcaatacgctgagctgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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