Pseudomonas rhodesiae: HRH33_13260
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Entry
HRH33_13260 CDS
T07097
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
prx
Pseudomonas rhodesiae
Pathway
prx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HRH33_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prx03400
]
HRH33_13260
DNA repair and recombination proteins [BR:
prx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HRH33_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DDRGK
HD_4
GLD3_KH3
Motif
Other DBs
NCBI-ProteinID:
QKJ73507
LinkDB
All DBs
Position
complement(2926932..2927771)
Genome browser
AA seq
279 aa
AA seq
DB search
MPRAIWKGAISFGLVHIPVSLVSATSHQGVDFDWLDKRSMDPVGYKRINKTTGKEVTKEN
IVKGVAYEKGRYVVLSEDEIRSAHPKSTQTIEIIAFVASEQIPLQNIDTPYFLAPDKRGG
KVYALLRETLKKTGKVALANVVLHTKQHLAALMPLESALVLVMLRWPAEVRGLDELELGS
EVTKPSLAKGELDMAKRLVEDMSADWQPEEYRDSFQEKIMALVEKKAKAGKIEDVESQEG
EDERKSADVIDLTELLKRSLAGKPAAKKPAAKKSSKKAS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccacgggcaatctggaaaggcgcaatcagtttcggcttggttcatatcccggtgtcg
ctggtctcggccacgtcccatcagggcgtggatttcgactggctggacaagcgcagcatg
gacccggtgggctacaagcgcatcaacaaaaccacgggcaaggaagtcaccaaagagaac
atcgtcaagggagtggcctatgagaaaggccgctatgtggtgctcagcgaagacgagatc
cgctctgcccaccccaagtcgacccagaccatcgagatcatcgccttcgtcgccagcgag
cagatccccctgcaaaatatcgacacgccgtactttctggcgccggacaaacgcggcggc
aaggtctatgccctgctgcgcgaaaccctgaaaaaaaccggcaaggtggccctggccaat
gtagtgctgcacaccaaacaacacctggcagcattgatgcccctggaatcggcgctggtg
ctggtgatgctgcgatggcccgccgaggtgcgcggcctggatgagctggagctgggcagc
gaggtgaccaaacccagcctggccaagggcgagctggacatggccaagcgcctggtggaa
gacatgagcgctgactggcagcccgaggaataccgcgacagctttcaggaaaagatcatg
gctctggtggagaaaaaagccaaagccggcaagatcgaggacgtggaatcccaggaaggc
gaggacgagcgcaagtctgcagacgtgatcgacctgaccgaactgctcaaacgcagcctg
gccggtaagcctgcggcgaaaaaaccggcggcgaaaaagtcttcgaaaaaagcctcttga
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