Pseudomonas savastanoi pv. savastanoi: PSA3335_01305
Help
Entry
PSA3335_01305 CDS
T07948
Name
(GenBank) type VI secretion system-associated protein
KO
K11893
type VI secretion system protein ImpJ
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSA3335_01305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psav02044
]
PSA3335_01305
Secretion system [BR:
psav02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSA3335_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
ARD09844
LinkDB
All DBs
Position
complement(293120..294463)
Genome browser
AA seq
447 aa
AA seq
DB search
MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAESTLRSTPFHWGVQTLEVDVEALATGSL
QLKRLKLVFPDGSLYDAPQHDPLPAARDLKNLIKGGEIKVYAALKLPEPFGLNYVEDGQE
QKSARRFRKQFDTLPDLNEGDLENEITSLRLNVVMLVDGDTLDGYSYCPIARLARNSIGG
FNLDAHFVHPTLHVGTHETLVGLGRRLISVLQAKSKALSGRRRERADQIAEFGSSDVTLF
WLLNTVNRAYPQLAHLLAHPRLHPERLYLFLAELAGGLLTFSLDTQLTDIPDYDHQDPAA
SLVKLDELVRLLLENVIPNQCIVINLSQVRPSYWQGQLLDPRLTEADFYISVHADMPGSS
LLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHSTRLPNAIPVRLDNHYFSIEPHGRVYER
MMEAQAISFYAPSALTNLKLELLAVLK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaagccgcgtgatgtggtcggaaggcatgttccttttgccacaacatttc
caatatcaggatgagtttcaccagcatcagcttgctgagtcgacactgcgttccacgcct
ttccattggggcgtgcaaacgctggaagtcgacgtcgaggcattggccacaggctcgttg
caactgaagcgcctgaagctggtgttccctgacggcagcctttacgacgcgccgcagcac
gacccgctgcccgccgcccgcgacctgaaaaatctgatcaagggtggagaaatcaaggtc
tatgcggcgctcaagctgcccgagccctttggcctgaactacgttgaagatggccaggaa
cagaagagcgcccggcgctttcgcaaacagttcgacaccctgcctgacctcaacgaaggc
gatctggaaaacgagatcaccagcctgcgtctgaacgtcgtgatgctggtcgatggcgac
actctggatggctacagttattgcccgattgcccgactggcacgcaatagcatcggcggt
ttcaaccttgacgcgcattttgtgcaccctacgttgcacgtgggcacccacgagacgctg
gttggccttggcagacgcctgatcagcgtgctgcaagccaagagcaaggcactttctggc
cgccgccgcgaacgtgccgaccagattgccgagttcggttccagcgacgttacgttgttc
tggctgctgaatacggtcaaccgcgcctacccgcagttggcccatctgctggcgcaccca
cgcctgcacccggagcgcctgtatctgtttctcgcggaactggcgggcggtttgctgacg
ttctcgctggacacccagctcactgacatccccgattacgatcatcaggacccggcggcc
tcgctggtgaagctcgacgaactggttcgtctgctgcttgagaacgtgattccgaaccag
tgcatcgtcatcaatctgagccaggtccggccttcgtactggcagggccaattgctcgac
ccacgccttaccgaagcggatttctatatttcagtgcatgccgacatgcccggctccagc
ctgctggaactggtgccgcgtgcattcaaggtcggctcgccggaggacatcgaggtggtc
gtcaacagcgccatgccgggcgtcaccctgaaccactcgacacgcctgccaaacgccatt
ccggtgcgcctggacaaccattacttctccatcgagccgcatggccgggtgtacgaacgc
atgatggaagcccaggccatttccttctacgcgcccagcgcgcttaccaatctcaagctt
gaactgttggcggtgcttaaatga
DBGET
integrated database retrieval system
