KEGG   Pseudomonas savastanoi pv. savastanoi: PSA3335_13005
Entry
PSA3335_13005     CDS       T07948                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
psav  Pseudomonas savastanoi pv. savastanoi
Pathway
psav03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:psav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PSA3335_13005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psav03400]
    PSA3335_13005
DNA repair and recombination proteins [BR:psav03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PSA3335_13005
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ARD11921
LinkDB
Position
2836159..2837064
AA seq 301 aa
MARAIWKGAISFGLVHIPVALVSATTSTSVDFDWLDKRSMDPVGYKRINKVTGKEVTSEN
IVKGVAYEKDRYVVLSEEEIRSAHPKSTQTIDIFAFVDSQQIPLQNIDTPFFLTPDKRGE
KVYALLRETLVDTKKVALANVVLHTREHLAAVMPLESALVMVILRWPADVRELDTLELSD
AVTDVQLNKSERDMARRLVKDMSADWQPEQYRDTFQDKIMHLVKTKADEGEIEDVETDPA
EEERKSADVIDLTDLLRRSLAGKGGASKGKASKPAAKEKPADKAAAKPKRPAARKKTSKA
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcaagggcaatctggaagggcgcaatcagcttcgggctggtgcatataccggtcgca
ttggtgtcggcgacaacgtcaaccagtgtcgacttcgactggctcgataaacgcagcatg
gacccggtcggctacaagcggatcaacaaggtcaccggcaaggaagtcaccagcgaaaac
atcgtcaagggcgtggcgtacgagaaggatcgctatgtggtgctcagcgaggaggaaatt
cgttccgcgcaccccaaatcgacgcagaccatcgacatattcgcctttgtcgacagccag
cagattcctttgcaaaacatcgacacgcctttttttctgaccccggataaacgcggcgaa
aaagtctacgcgctgctgcgcgaaacccttgtcgacaccaaaaaggtggcgctggccaat
gtcgtgctgcatacccgcgaacacctggcggcggtcatgccgctggagtcggcgctggtc
atggtgatcctgcgctggcctgccgacgtgcgtgagctggacacactggaactgagcgac
gcagtgacggacgtacagttgaacaaaagtgaacgcgacatggccaggcgtctggtcaag
gacatgagcgccgactggcagcctgagcagtaccgcgacacttttcaggacaagatcatg
cacctggtcaaaaccaaggcagacgaaggcgagatcgaggatgtcgagacggatccggcc
gaggaagagcgcaaaagtgccgatgtcattgacctcaccgacttgctgcgacgcagcctg
gcgggcaagggtggcgccagtaaaggcaaagcgagcaagcccgcagcaaaagaaaaacct
gctgacaaggccgcggccaagcccaagcggcccgcagcccgcaagaaaaccagcaaagcc
tcttga

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