Pseudomonas savastanoi pv. savastanoi: PSA3335_17360
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Entry
PSA3335_17360 CDS
T07948
Name
(GenBank) type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSA3335_17360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psav02044
]
PSA3335_17360
Secretion system [BR:
psav02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSA3335_17360
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BAMBI
Motif
Other DBs
NCBI-ProteinID:
ARD12661
LinkDB
All DBs
Position
complement(3808861..3810336)
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AA seq
491 aa
AA seq
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MNTKAIPQRDVNELHHGILDQIIAHTRLEPCDDAYGIAKRGVAAFIEELLKPRNNNEPVK
KALVDRMITEIDVKLSRQMDEIIHHVEFQALEASWRGLQLLIDRTDFRENIKIELLSVSK
QDLLEDFEDSPEVVQSGLYKHVYTAEYGQFGGNPVGAIIANYFFSPSAPDVKTMQYVSSV
ACMAHAPFIAAAGANFFGLEQFTGLPDLKDLSDHFEGPQFAKWQSFRQQEDARYLALTVP
RFLLRSPYEPEENPVKTFAYKENVANSHEHYLWGNTAYAFATKLTDSFAKFRWCPNIIGP
LSGGAVEDLPLHRFHSMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSA
SSVQKPKFFGNHSDGKIAELNYRLGTQLPYMMIVNRLAHYLKVLQREQIGSWKERADLES
QLNKWIRQYIADQENPSAEVRGRRPLRSAQIIVSDVEGDPGWYRVSLNIRPHFKYMGADF
TLSLVGKMEKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaaaagccataccgcagcgcgacgtaaatgagcttcaccatggaattctcgat
cagattattgcgcatacccgattagagccttgtgacgacgcctatggcattgccaaacga
ggggtggctgcatttattgaagagttgctgaagccgcgtaataacaacgaaccggtcaaa
aaagcgctggttgaccggatgattaccgagattgacgtcaagctgagtcgccagatggac
gagatcatccatcatgtagaatttcaggcattggaagcttcatggcgtgggttgcagtta
ctgattgatcgaaccgattttcgtgaaaatataaaaatcgagttattaagcgtttccaaa
caggatcttctagaggatttcgaagattcacctgaagttgttcagtcgggcctctataaa
cacgtctacaccgctgagtacggccagtttggcggtaatcccgttggcgcaatcatcgcc
aattattttttctcgccaagcgcccctgatgtcaaaaccatgcaatacgtttcaagcgtt
gcctgtatggcgcatgcacctttcatcgctgctgcgggtgccaattttttcgggcttgag
cagttcaccggtctgcctgacctcaaggatctgagcgatcatttcgaagggccgcagttc
gccaaatggcagagcttccggcagcaagaagacgctcggtatcttgccttgaccgtgccg
cgtttcctgctgcgcagtccttacgagccagaggaaaacccggtaaaaacgtttgcctac
aaggaaaacgttgcgaatagccacgagcactatctatggggaaatacggcctatgcattt
gcgacgaagctgacagacagttttgccaaatttcgttggtgtcccaacatcatcgggcca
ctgagtggtggtgcggtggaagaccttcccttgcaccgattccacagcatgggtgaaatc
gagacaaagattccgacggaggtcctggtctctgatcgccgagagtatgaactcgcagaa
gaggggtttatcgcgctgaccatgcgcaaaggaagcgataacgccgcgttcttttccgcg
agttcggtgcaaaagcccaagttctttggcaaccattcggatggcaaaatagccgagctt
aattacagactggggacccaactgccctacatgatgattgtcaaccgcctcgcgcactac
ctcaaggtgttgcagcgagagcagatcgggtcctggaaagagcgagcggatctggagagt
caacttaataaatggattcgccagtacattgcagatcaggaaaacccgagcgcggaagtg
cgaggaagacgcccgttacgctcagcgcaaattattgttagcgacgttgaaggtgatcct
ggctggtaccgtgtcagtttgaatatccgtcctcatttcaaatatatgggggctgatttt
actctgtcgctggtcgggaaaatggaaaaggaatag
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