Pseudomonas savastanoi pv. savastanoi: PSA3335_24045
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Entry
PSA3335_24045 CDS
T07948
Name
(GenBank) tRNA dihydrouridine synthase DusB
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psav03016
]
PSA3335_24045
Transfer RNA biogenesis [BR:
psav03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
PSA3335_24045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
SOR_SNZ
DeoC
DHO_dh
NanE
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
ARD13850
LinkDB
All DBs
Position
5239918..5240931
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AA seq
337 aa
AA seq
DB search
MSAVRIGPYTVQNGLVLAPMAGVTDQPFRQLCRQLGAGLVVSEMVTSDMSLWNSRKSRLR
MIHEGDPEPRSVQIAGGDPQMLADAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKD
EQLVNDILQAVVAAVDVPVTLKIRTGWDRDNRNGLTVAKIAEQAGIQALAVHGRTRADLY
TGEAEYDTIAMIKQAVSIPVFANGDIDSPEKARRVLQATGADGLLIGRAAQGRPWIFREI
EHFLRTGEKLPAPQSSEVERILLEHLAALHVFYGDVMGVRIARKHVSWYLATLPGAREFR
AHFNRLEDTEAQCANVREFFSQGCKGPDNENDKEVAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagtacgcatcggcccatatacagtgcaaaacggcttggtcctagccccgatg
gcgggcgtcaccgaccagcctttccgtcagctgtgccgacaactcggtgccggcctggtg
gtttcggagatggtcaccagtgacatgagcctgtggaacagccgcaaatcgcgtctgcgc
atgatccacgaaggtgatcccgagccgcgctcggtacagatcgccggcggtgatccgcag
atgctggcagacgcagcacgtgccaatgtcgaactgggtgcccagatcatcgacatcaac
atgggttgcccggccaagaaggtctgtaacaaggcagcaggttcggcgctgttgaaagac
gagcaactggtgaacgacatcctgcaagccgtcgtggctgcggtcgatgtgccggttacg
ctgaagatccgcaccggatgggatcgcgacaaccggaacggcctgacagtggcgaaaatc
gccgagcaggccggtattcaggcactggcggtacacgggcgaacccgtgccgacctttac
accggcgaagccgagtacgacaccattgccatgatcaaacaggcagtgtcgataccggtg
tttgccaacggcgacatcgattcacccgaaaaagcccggcgcgtgctacaggccaccggc
gcagacgggttactgattggcagggccgcccaagggcgtccctggatttttcgcgagata
gaacacttcctgcgtaccggagaaaaactcccggctccgcagtcgagtgaagtggaacgt
attctgcttgagcatctggcagcgctccacgttttctatggagatgtgatgggcgtgcgt
attgcacgcaaacacgtcagttggtatctcgcaaccctgccgggcgccagagagtttcgc
gcccacttcaatcgtttggaagatacggaagcacagtgcgccaacgtccgggagttcttc
agccaaggctgcaagggcccggataacgagaatgataaagaggtggccgcatga
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