Pseudoalteromonas sp. A25: PA25_19620
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Entry
PA25_19620 CDS
T07990
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PA25_19620 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_19620 (recB)
Enzymes [BR:
psaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PA25_19620 (recB)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PA25_19620 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BBN81977
UniProt:
A0A5H2YFT7
LinkDB
All DBs
Position
1:complement(2352283..2355834)
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AA seq
1183 aa
AA seq
DB search
MQMLNPQLMPIAGSSLIEASAGTGKTYTITGLYLRCLLGLQVSEQPSAPLSVEQILVVTF
TEAATQEIKERVRARILLARDTLLGQPCKDELVNSVLSQVDDPHYAFVLLDAAAKSIDEA
AIFTIHGFCQRMLKQHAFESNVAFNLEFVLDESELVLEAIKDHWRSFVYPLDRDTTQAII
EHYKSPQSLAKDVISALNKEQATITPQLDLQTVLAARTQYQQQAQKFKQSLLRSDFFSVL
ASSGLAKNKTPGRVANIDALIAYCQNDDWYFEFGSAKHSFSIWGEAALSNPANYKKGAKL
IEHPMLSEFDKMAQLHEQVSTGLKIAILQHSVVEVRRLLRAHKQQHGLISPDDLLRQLYE
ALKSEQGDVLVAKIAQLFPVAMIDEFQDTDPIQYGIFDTVYGRDGASALTMIGDPKQAIY
GFRGADIFTYIYAKKQVEECNQYTLATNYRSATGVVAAVNAIFSNHEHSFIFNKAIPFIS
VTAHGKSEDSRFSSNLLGNAALQFSVYKDDAPITSKSKAQPVLAKHYANKIAQLLIEAQE
GKALIGKNAVQAGDICVLVRDRGEASIIKSALSSLAIPSVYLARDSIFSQPISLAILSFL
EVLHGKYDEAALRGILVSPLFALDYQQVFQLRTNEQQWQSYLDQFSALQKLWYKQGAMAM
LEQLLVQNKLQALWQAQGYNVERWLTDYRHLAELLQQKQIELDGTLRVLRWLATQTQQAS
QDSAQVRLESDADLVKIVTMHASKGLEYPIVYLPFVSSYREASDVLFHRDGQLVYALDAD
KDEQALAEQERLAEDIRLLYVALTRAIHFCDVGLFNVAAGRSKKPGITQTAIGYALFGAQ
SFATQALWHEALESFCAGHRDIKLNWLSDDVQAAAQVAAPLTQPQSLSVKPVTAQIERNW
RATSFSQLSYQSHVDDRPLGALDENHQLDLPDQGVHLANISQDSYTFPKGAKPGSCLHEI
FELIDFTSPDLPASNEQLPLSEAIEKSLSKYHIDEQWQMPVYDWIKGCLQCQLNTEIGLQ
LAKLAPQDCLVEMEFYLPLEPLNATQLNRLVSDITGQHSQLSFDSVKGLLKGFIDLIFVY
QGKYYILDYKSNYLGDNPDDYQADNLKLAMDAHQYHLQYMIYSVALHRLLIQRVKDYQPE
THLGGVYYLFLRALPDEAGVFFNQLSTEQLLKLDALFSQGSLL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgcttaatccacaattgatgcccatagccggtagtagtttaattgaggccagt
gcaggtacgggtaaaacttataccattaccggtttgtacttacgttgcttacttggtcta
caggtctctgaacaaccaagcgcgccattaagtgttgagcagattttagtggttaccttt
accgaagcggcaacgcaagagattaaagaacgggtgagggcgcgtattttgctcgcacgc
gataccttacttgggcagccttgcaaagatgagttagtaaatagtgtgcttagtcaggta
gatgatcctcactacgcttttgtactgttagacgctgcggcgaaatcaatcgatgaggcg
gcaatttttaccatccacggtttttgtcaaagaatgttaaaacagcacgcatttgagtct
aatgtggcatttaatttggagtttgttttagatgagtctgagcttgtcttagaggcaatt
aaagatcattggcgcagctttgtttatccattagacagagataccacgcaagccattatt
gagcattataagagccctcaatcactggcaaaagacgttatcagtgctctaaataaagaa
caggcgactattactccccagttagatttgcaaacggtgctcgcagcgagaacacaatat
cagcaacaggctcaaaagtttaagcagtcattgctgcgtagtgacttttttagcgtgctt
gccagttctggcttagcgaaaaataaaaccccgggcagagtggcaaatatcgacgctttg
attgcctattgccaaaacgacgattggtattttgaatttggtagtgctaaacattcgttt
tcaatctggggcgaggcggccttatccaacccagctaactataaaaagggcgcaaaactg
attgaacaccccatgcttagtgagtttgataagatggcccagttgcatgaacaagtaagc
acagggctaaaaattgcgatattgcagcacagtgtggttgaggtacgtcggttgttgcgt
gctcataagcagcagcatggcttaatcagccccgatgatttattgcgtcagctttatgag
gcgttaaagtctgagcaaggcgatgtcttagttgctaaaattgcccagctttttcccgta
gcgatgatcgatgagtttcaagataccgatccaatccagtatggcatatttgatacagtt
tatggccgtgacggcgcgagtgcattaaccatgataggtgaccctaagcaagccatttat
ggctttcggggagcagatatatttacttatatctatgcaaaaaagcaagttgaagagtgt
aatcaatataccttagcaaccaactatcgctctgccacaggggtggttgcggcggtcaat
gcgatattttctaaccatgagcatagttttattttcaacaaagccattccatttatttct
gtaacggctcatggcaaatcagaggatagccgcttttcatcaaaccttttgggtaatgcg
gctttacaatttagtgtttacaaagatgatgcgccaataaccagcaagtctaaagcacag
ccagtactggcaaaacattatgcaaataaaattgcccagctactgattgaagcgcaagaa
ggcaaggcattgataggaaaaaatgccgtgcaagcgggtgatatttgtgtattggtgcga
gatagaggtgaggcgagcatcatcaagtcggcgttgtctagcttagccatacccagtgtt
tacttggcgcgagatagtattttcagtcagccaattagccttgcaatactgagcttctta
gaagtattgcacggtaagtacgatgaggctgcactgcgaggtatattagtaagcccctta
tttgcgctggactatcagcaagtttttcaacttcgtactaatgagcagcaatggcaaagt
tatcttgaccaatttagtgcattgcaaaagctgtggtacaaacaaggcgctatggccatg
cttgagcagttacttgtgcaaaacaagctgcaagcgctttggcaagctcagggctataat
gttgagcgatggctgaccgattatcgacatttggctgagcttttacaacaaaagcaaata
gagcttgatggcacgttacgagtgctacgctggttagcaacacaaactcaacaagcatca
caagatagtgcgcaggttcgactagaaagcgatgcggatttagtgaagatagtcactatg
cacgcatctaaaggtttggagtaccccatcgtttatctgccatttgtgagtagttaccgc
gaggccagtgacgtacttttccatcgagatgggcaattagtctacgcactagatgccgat
aaagatgagcaggcactcgctgagcaagagcgtttagctgaagatatacggttgttatac
gttgcgcttacaagagctatccatttttgtgatgtggggctgtttaacgtggcggcaggg
cgcagcaaaaagcctggtataacgcaaactgccataggttatgcactgtttggcgctcag
agctttgcaacgcaagctttgtggcacgaagcgttagagtcattttgcgcgggacatcgg
gatattaagctaaactggttatcagatgacgtgcaagctgcggctcaagttgctgcacct
ctaacacaacctcagtctctatccgttaagccagtgaccgcacagattgaacgtaactgg
cgcgctactagctttagccaattaagttatcaaagccatgttgatgataggccgcttggt
gcgctggatgaaaatcatcagttagatttaccagatcagggggttcatttagcaaatata
tcgcaggactcatatacctttccaaaaggcgcaaagccgggaagctgcttacatgagata
tttgagcttattgattttacatcgcctgatttacctgcaagcaatgagcaattaccgtta
agtgaagcgatagaaaaaagcttgagcaagtatcatattgacgagcaatggcaaatgcca
gtatacgactggataaaaggttgtttgcaatgccaactcaataccgaaatcggcttgcaa
cttgctaagctagcaccgcaagactgtttggtagaaatggagttttaccttcctttagag
ccgctcaatgccacacagttgaatcgtttggtgagtgatatcaccggtcagcatagccaa
ctaagttttgacagtgtaaaaggactattaaaaggctttatcgatctgatctttgtttac
caaggtaagtattacattttggattataagtctaattatcttggcgataacccagatgat
taccaagctgataatttaaagctcgcgatggatgctcatcagtatcatctgcaatacatg
atttactcggtcgcattacatcgcttgctgatacagcgtgtcaaagattaccaaccagag
acccatttagggggcgtttattacttgtttttaagagcactgcctgatgaagcaggggtg
ttttttaatcagttaagtacagaacaattgctaaagttagatgcactgtttagccaaggt
agtttgctatga
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integrated database retrieval system
