KEGG   Pseudochrobactrum algeriensis: KHQ08_04570
Entry
KHQ08_04570       CDS       T07380                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pscq  Pseudochrobactrum algeriensis
Brite
KEGG Orthology (KO) [BR:pscq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pscq03400]
    KHQ08_04570
Enzymes [BR:pscq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KHQ08_04570
    5.6.2.6  RNA 3'-5' helicase
     KHQ08_04570
DNA repair and recombination proteins [BR:pscq03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KHQ08_04570
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII PSD4
Other DBs
NCBI-ProteinID: QVQ37343
LinkDB
Position
611764..614292
AA seq 842 aa
MKPISAADKSSGQDVLPAVFAQWFADKGWQLRQHQRELLERSLAGQSTLLIAPTGAGKTL
AGFLPALTDLTLRAQSGARNQPRRSGIHTLYISPLKALAVDIERNLSKPVAEMALPVTIE
TRTGDTPAHKRQRQKLAPPDILLTTPEQLALLLAGKDAADFFTDLRFVIFDELHALVTSK
RGQLLALGLARLRNLAPQMQTIGLSATVAEPNDLRRWLVAQGDTPALAGLVTVQGGAKPE
ISILQSGERIPWAGHSAGYALGDVYELIRQFRTTLIFVNTRSQAERIFQELWRINELTLP
IGLHHGSLDATQRRRVEEAMSRNALRAVVATSTLDLGIDWGDVDLVIHIGAPKGASRLAQ
RIGRSNHRMDEPSRAVLVPANRFEVLECNAALVANVEGVQDTPPLADGALDVLAQHILGM
ACAEPFHADVLYAEICSAAPYQHLSRHQFDHVLDFVATGGYALRVYERFAKIRPMPDGRW
RVSNGKVAQQYRLNIGTIVEAPELTIRMIRKGRKLAGSAASPMRGGRILGRIEEYFLETL
TQGDTFFFAGQTVRFEGIRDNECLVSQASGEDAKVPVYAGGKFPLSTYLASEVRAMLADD
KSWQQLPDQVRDWLQLQRNRSLLPAQNELLVETFPRQNRFYMVCYPFEGRLAHQTLGMLL
TRRLDRTGARPLGFVATDYSLGLWAARDLNAMMEDGELSLDALFDQDMLGDDLEAWLDES
YLLKRTFRNCALISGMIERRHPGKEKTGRQLTISTDLIYDVLRSHEPDHILLQATRAEAA
AGLLDIARLGTMLQRVRDHIVHRNLPHISPLALPVMLEIGKERVAGTDDDLLEDMTREAL
EN
NT seq 2529 nt   +upstreamnt  +downstreamnt
gtgaaaccgatatccgctgccgataaatcttccggtcaagatgttctgcccgctgtcttt
gcacagtggtttgcggataagggctggcagctgcgccagcaccagcgtgaattgctggag
cgcagtctggcggggcagtccacattgctgattgcacccacaggagccggtaaaacgctg
gccggttttttgcctgcactgactgatctgacattgcgcgcgcagagtggtgcgcgtaat
cagccacgccgttccggtattcacacactttatatctcgccgctcaaagcactggctgtt
gacattgagcgcaatctgtcaaagccggttgcggaaatggcactaccggtaactattgaa
acccgcacaggggacacgcctgcccataaaaggcagcggcagaaactggcgccgccggat
atattgctcaccacaccggagcaactggctctgttactggcgggcaaagatgcggcagat
ttctttacggatttgcgttttgtaatttttgatgagctgcatgcgctggttacttcaaaa
cgcgggcagttgctggcactggggctggcacggctgcgcaatcttgcaccgcagatgcag
acaatcggcctgtcggcaacagtggcggagccgaatgatctgcgccgctggctggttgcg
cagggcgatactcctgcactggccggactggttactgtgcagggcggcgcaaagccggag
atcagcatattacaatccggtgagcggataccatgggccggtcacagtgccggctatgca
ctcggcgatgtctatgaactgatccggcaattccgcacgacattgattttcgtgaatacc
agatcgcaggccgagcggatttttcaggagctctggcgtatcaatgagctgaccttaccg
atcggcctgcatcacggttcgctggatgccacacagcgtcgccgtgtggaggaggcaatg
tcccgcaatgctttgcgtgcagttgtggcgacctcgacccttgatctggggattgattgg
ggtgatgtcgatctggttatccatattggtgcgccgaaaggtgccagcagactggcgcag
cgtatcgggcgctccaatcaccgtatggatgagccaagccgtgcggttctggtgcctgca
aaccgttttgaagtgctggaatgcaatgcggcgctggtggccaatgtggaaggggtgcag
gatacgccgcctctggccgacggggctctggatgtgctggcgcagcatatactcggcatg
gcctgtgccgaaccgtttcatgcggatgtgctctacgcggaaatatgttcggcagcaccc
tatcagcatttatcccgtcatcagtttgatcatgtgctggattttgtggcaaccggtggc
tatgcgctgcgtgtctatgagcggtttgcaaaaatccgcccgatgccggacgggcgctgg
cgtgtcagtaatggtaaagttgcccagcaatatcgcctcaatatcggtacgattgttgaa
gcaccggaactgactatccgcatgatccgtaaggggcggaaacttgcaggaagtgctgcc
agccccatgcgcggcgggcggatattagggcgtatcgaagagtattttctcgaaacgctg
acacaaggcgatacgttcttttttgcaggtcagactgtgcgttttgaaggtatccgcgac
aatgaatgtctggtgtcgcaggcctccggagaggatgcgaaagtgccggtttatgcgggc
ggtaaatttccgctctcaacctatctggcctcggaagtccgtgcgatgctggcggatgac
aaaagctggcagcaattgccggatcaggtgcgtgactggctgcaattgcagcgtaaccgc
tccctgctaccggcacagaacgaattgctggtcgagacttttccgcgccagaaccggttt
tatatggtgtgctatccgtttgaaggcaggctggcacatcagacattggggatgttgctg
acgcgacggctggatcggacaggtgcacgaccgctgggatttgtggcaacggattattcg
ctggggctgtgggcggcacgtgatctgaatgcgatgatggaagatggtgaattatcgctg
gatgcgttgttcgatcaggatatgctcggggatgatctggaggcatggctggatgaaagc
tatctgctgaagcgcactttccgcaattgtgcgttgatttccggtatgattgaacggcgc
catccgggtaaggaaaagaccggcaggcagctgacgatttccacggatctgatctatgat
gtgttgcgcagccacgagccggaccacattttactgcaggcgacacgagcagaggccgca
gcggggctgctggacattgcccgtctcggaacaatgttgcagcgtgtacgcgatcacatc
gttcatcgtaacctgccgcatatttcgcctttggcattgcctgtgatgctggaaatcggc
aaagagcgggttgccggaacagatgatgatttgctggaagacatgacccgtgaggcactg
gaaaattga

DBGET integrated database retrieval system