Pseudoxanthomonas spadix: DSC_05145
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Entry
DSC_05145 CDS
T01643
Name
(GenBank) tRNA-dihydrouridine synthase B
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
psd
Pseudoxanthomonas spadix
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psd03016
]
DSC_05145
Transfer RNA biogenesis [BR:
psd03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
DSC_05145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
DHO_dh
NanE
SOR_SNZ
ThiG
His_biosynth
TMP-TENI
PEP_mutase
Oxidored_FMN
PcrB
Pterin_bind
PGM_PMM_II
FMN_dh
NMO
Motif
Other DBs
NCBI-ProteinID:
AER55682
UniProt:
G7UQ70
LinkDB
All DBs
Position
complement(913492..914505)
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AA seq
337 aa
AA seq
DB search
MHIGPYKIDPPLILAPMAGVTDKPFRQLCKQLGAGLAVSEMTISDPRFWNTDKSLRRMDH
AGEPAPVSVQIAGTEPQQLARAARYNVDHGAQIIDINMGCPAKKVCNAWAGSALMRDEGL
VARIVEAVVKAVDVPVTLKIRTGWDAGHRNAPVIARIAQDAGIAALAIHGRTRDQQYTGV
AEYQTIAAIKAALSIPVFANGDIDSPQKAAQVLRATGADAVLVGRAAQGRPWIFREIAHF
LATGEELPPPSISEVRQILLGHLHALHEFYGELQGVRIARKHLGWYVKNRPEQSTEEMAA
FRAVVNRAETAEAQLRLTADYFDALEAGVPSGFATAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcggcccctacaagatcgatccaccgctgatcctggcgccgatggccggggtg
accgacaagccgttccggcagctgtgcaagcagctgggtgcgggcctggcggtctcggag
atgaccatttccgatccgcgtttctggaacaccgacaagtcgctgcgacgcatggaccat
gccggcgagccggccccggtcagcgtgcagatcgccggcaccgagccgcagcagctggcc
agggccgcgcgctacaacgtcgaccacggcgcccagatcatcgacatcaacatgggctgt
ccggccaagaaggtgtgcaacgcctgggccggctcggcgctgatgcgcgatgaaggcctg
gtggcgcggatcgtcgaggcggtggtcaaggcggtcgatgtgccggtgacgctgaagatc
cgcactggctgggatgccggacatcgcaacgcgccggtgattgcccgtatcgcccaggac
gccggcatcgccgcgctggccatccacggccgcacccgcgaccagcaatacaccggcgtg
gccgagtaccagaccatcgccgcgatcaaggcggcgctgtcgatcccggtgttcgccaac
ggcgatatcgattcaccgcaaaaagccgcgcaggtgctgcgcgccaccggtgccgatgcg
gtgctggtcggacgcgccgcgcagggccggccgtggatcttccgcgagatcgctcatttt
ctggccaccggcgaggaactgccgccaccgtcgatcagcgaggtgcgccagatcctgctc
ggccatctgcatgcgctgcatgagttctacggggaactgcagggcgtgcgcatcgcccgc
aagcacctgggttggtatgtgaagaaccgcccggaacaatccactgaagagatggccgcc
ttccgcgcggtggtcaaccgcgccgaaaccgccgaggcgcagttgcgcctgaccgccgat
tacttcgacgcgctggaagctggcgtgccgtccggattcgccaccgcagcctga
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