Pseudonocardia sp. HH130629-09: XF36_07005
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Entry
XF36_07005 CDS
T04082
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pseh
Pseudonocardia sp. HH130629-09
Brite
KEGG Orthology (KO) [BR:
pseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pseh03019
]
XF36_07005
03009 Ribosome biogenesis [BR:
pseh03009
]
XF36_07005
03036 Chromosome and associated proteins [BR:
pseh03036
]
XF36_07005
Enzymes [BR:
pseh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
XF36_07005
Messenger RNA biogenesis [BR:
pseh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XF36_07005
Ribosome biogenesis [BR:
pseh03009
]
Eukaryotic type
90S particles
RNase
XF36_07005
Prokaryotic type
rRNA processing factors
XF36_07005
Chromosome and associated proteins [BR:
pseh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
XF36_07005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ALE82930
UniProt:
A0A0M4PZH0
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Position
1559966..1560715
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AA seq
249 aa
AA seq
DB search
MGDKSVTGPVTDRSPLLSALGVDLDETLLTLALTHRSYAYEHGGLPTNERLEFLGDSVLS
IVITERLYRDHPDLPEGQLAKLRASVVNMHALATVAVALPTPDGVPHGLGAYLYLGRGEE
LTGGRSKASILADATEALLGAVYLAHGLEPSRELIHRLFADLLHSAPLLGAGLDWKTSLQ
ELTAAGGHGVPEYRIDEEGPDHLKVFTATAVVGGRDLGSGAGRTKKEAEQKAAEIAWHAL
SDESAGSGR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgacaagagtgtgaccggtccggtgacggaccggtcacctctgctgtccgcactc
ggtgtggacctggacgagacgctgctcacgctggcgctgacccaccggtcctacgcctac
gagcacggtggactgccgaccaacgagcgcctggagttcctgggcgactcggtgctgtcg
atcgtgatcaccgagcggctgtaccgggaccacccggacctgcccgaggggcagctggcg
aagctgcgcgcgagcgtggtcaacatgcacgcgctcgccaccgtcgccgtggcgttgccc
acaccggacggtgtgccgcacggcctcggcgcgtacctgtacctggggcgcggtgaggag
ctgaccggtggccggtcgaaggccagcatcctggccgacgccaccgaggcgctgctcggc
gcggtgtacctcgcgcacggcctcgagccgtcccgcgagctgatccaccggctgttcgcg
gacctgctgcacagtgccccgttgctcggcgcgggcctggactggaagaccagcctgcag
gagctcaccgccgccggcgggcacggtgtgcccgagtaccggatcgacgaggagggcccg
gaccacctgaaggtgttcaccgcgacggccgtggtcgggggtcgtgacctcggcagcggc
gcgggacgcaccaagaaggaggccgagcagaaggcggccgagatcgcctggcacgcgctg
tccgacgagagtgccggctccgggcggtag
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integrated database retrieval system