Pseudomonas sp. MRSN12121: TO66_12095
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Entry
TO66_12095 CDS
T03702
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem00250
Alanine, aspartate and glutamate metabolism
psem00310
Lysine degradation
psem00350
Tyrosine metabolism
psem00650
Butanoate metabolism
psem00760
Nicotinate and nicotinamide metabolism
psem01100
Metabolic pathways
psem01120
Microbial metabolism in diverse environments
Module
psem_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
TO66_12095 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TO66_12095 (gabD)
00310 Lysine degradation
TO66_12095 (gabD)
00350 Tyrosine metabolism
TO66_12095 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
TO66_12095 (gabD)
Enzymes [BR:
psem01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
TO66_12095 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
TO66_12095 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
TO66_12095 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AJO78000
UniProt:
A0A0C5E7K7
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All DBs
Position
2617416..2618849
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AA seq
477 aa
AA seq
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MSALIRNGNYIDGQWSSGGPLYPVFNPANGELIAQVQKAGAEATGLAIDAANRALPAWRG
LTAKERSQRLKRWSELMLGNQRELATLLSREQGKPLAEAMGEVVYAASFLEWFGEEAKRA
YGDVIPSHKADARIIVTKEAIGVVAAITPWNFPLAMVTRKVGPALAAGCTMVLKPSEETP
LSAFALAVLAEQAGIPAGVFNIVSGDAAAIGAALQASSIVRKLSFTGSTRTGKLLMRQAA
DTLKKVSLELGGNAPFIVFDDADLDAAVKGAMASKFRNTGQTCVCVNRFFIQDGVYEAFT
GKLAAAVAAMRVGSALEGETEQGPLINAAALAKVELHVGDALEKGARLLCGGRRHALGGT
FYEPTILTEASSDMLIAQDETFGPVAACFRFKDEAEVLQRANDTPFGLSAYFYSRDIGRV
WRMAEGLEAGMVGINEGIISTEVAPFGGIKESGLGREGSRYGLEDYLEIKYLLMGGL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgctgattcgtaatggcaactacatcgacggccaatggtccagcggcggcccc
ctgtacccggtattcaacccggccaacggcgagctgatcgcccaggtgcaaaaggccggc
gccgaggcgaccgggctggccatcgatgccgccaaccgggccttgccggcctggcgcggc
ctcaccgccaaggagcgcagccagcgcctgaaacgctggagcgagctgatgctgggcaac
cagcgcgagctggcgaccctgctcagtcgcgagcagggcaagccgctggccgaggccatg
ggcgaagtggtgtacgcggcgagcttcctcgagtggttcggcgaagaggccaagcgcgcc
tatggcgatgtgatccccagccacaaggccgacgcgcggatcatcgtgaccaaggaggcc
atcggcgtggtcgcggcgatcactccgtggaacttccccctggcgatggtcacgcgcaag
gtcgggccggccctggcggccggctgcaccatggtcctcaagccttcggaagagacgccg
ctgtcggccttcgccctggcggtgctggccgagcaggcggggatcccggccggggtgttc
aacatcgtttccggcgacgccgcggccatcggcgctgcgctgcaagcctcgagcatcgtg
cgcaagctgtcgttcaccggctcgacccgcaccggcaagctgctgatgcgccaggccgcc
gacaccttgaaaaaggtctcgctggagctgggcggcaacgcacctttcatcgtcttcgac
gacgccgacctggacgcggcggtgaagggcgccatggcctcgaagttccgtaacaccggg
cagacctgcgtctgtgtgaaccgtttctttatccaggacggcgtctatgaggccttcacc
ggcaagctggccgcggccgtggcggcgatgcgggtcggcagcgccctggagggcgagacc
gagcagggcccgctgatcaatgccgcggccctggccaaggtcgagctgcacgtcggcgat
gccctggagaagggcgccaggctgctgtgcggggggcgtcgccacgccctcggcgggacg
ttctacgagccgaccattctcaccgaggccagcagcgacatgctgatcgcccaggacgaa
accttcggcccggtggccgcgtgtttccgcttcaaggacgaggccgaggtgctgcagcgg
gccaacgacacgccgttcggcctgtccgcctacttctacagccgtgacatcggccgcgtc
tggcgcatggccgagggactggaggcgggcatggtcgggatcaacgaagggatcatctcc
accgaggtcgcaccgttcggcggtatcaaggaatcgggcctcggccgggagggctccagg
tacggcctggaggactacctggagatcaagtacctgctcatgggcgggctctga
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