Pseudomonas sessilinigenes: C4K39_2045
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Entry
C4K39_2045 CDS
T07575
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psep
Pseudomonas sessilinigenes
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psep03032
]
C4K39_2045
03400 DNA repair and recombination proteins [BR:
psep03400
]
C4K39_2045
Enzymes [BR:
psep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C4K39_2045
DNA replication proteins [BR:
psep03032
]
Prokaryotic type
DNA Topoisomerases
C4K39_2045
DNA repair and recombination proteins [BR:
psep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C4K39_2045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AZC23729
LinkDB
All DBs
Position
2124542..2127151
Genome browser
AA seq
869 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASAAKEPAAKRGKAAGEA
PALSPKEKARKQLVARMGVDPEHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLDR
EGEAIAWHLREAIGGDDERYKRVVFNEITKKAIQDAFSQPGELDIHRVNAQQARRFLDRV
VGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEVHADLGTAKNAKV
RFEVARENGEAFKPLNEAQAMAALEKLKASSYSVAKREDKPTSSKPSAPFITSTLQQAAS
NRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAVAMARSYIESEFGDKYLPASPNV
YSSKEGAQEAHEAIRPSDVHTHPSKLSGMERDAERLYELIWRQFVACQMPPAQYLSTTVS
VAAGEFELRAKGRILKFDGYTRVMPQVSKPGDDDVLPDMAQGEVLKLIKLDPSQHFTKPP
ARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESF
SNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFKNKLEVAEGAESGMRANQPVMTD
IPCLTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVLR
GKHRCPICSTAMDAYLLDEKRKLHICGNNPDCAGYEIEEGSYRIKGYEGPSLECDKCGSE
MQLKTGRFGKFFGCTNATCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGAS
GLFLAASQFPKNRETRAPLVLELIPHKDEIDPKYHFLCEAPQKDPDGRPAVVRYSRKTKE
QYVQTEVDGKPTGWRAFYDGGSWKIEDKR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggctaaggccaagaccatcaacaagtac
ttgggtaaccaatacgtggtgaagtcgagtatcggccatatccgagacctgcccaccagc
ggttcggcaagtgccgccaaggagccggccgccaagcgtggcaaggccgcgggcgaagcc
ccggcactgtcgccgaaggaaaaggcgcgcaagcagctggtggcgcgcatgggcgtcgac
cccgagcacggctggaaagccaagtacgaaatccttcccggcaaggaaaaggtcatcgaa
gagctgcgccgccttgccaaggatgccgacaccatctatctcgcaacggacttggaccgc
gaaggggaggccattgcttggcacctgcgcgaagccatcggcggtgacgacgagcgctac
aagcgcgtggtgttcaacgaaatcaccaagaaggcgatccaggacgccttctcccagccc
ggcgagctggatatccatcgggtcaatgcccagcaggcccggcgtttcctcgaccgtgta
gtgggctacatggtgtcgccgctgctgtgggccaagatcgcccgtggcctgtccgccggc
cgcgtgcaatcggtggcggtcaagttggtagtggagcgtgagcgcgaaatccgcgctttc
atccccgaagaatactgggaggtgcatgccgacctcggtaccgcgaagaacgccaaggtg
cgtttcgaagtggcgcgcgagaacggcgaggccttcaagccgctcaacgaagcccaggcc
atggcggccctggagaagctcaaggcgtcgtcctacagcgtcgccaagcgcgaagacaag
cccaccagcagcaagccttcggccccgttcattacttccaccctgcagcaggctgcgagc
aaccgcctgggcttcggggtgaagaagaccatgatgatggcccagcgcttgtatgaagcg
ggctacatcacctacatgcgtaccgactccaccaacctctcggccgacgccgtggcgatg
gctcgtagctatatcgagagcgagttcggtgacaagtacctgccagcctcgcccaatgtc
tacagcagcaaggaaggggcccaggaggcgcacgaagcgattcgtccgtccgatgtgcac
acccatccgagcaagctgtcgggcatggaacgtgatgccgagcgcctgtatgagctgatc
tggcgccagttcgtggcctgccagatgccgccagcgcaatacctgtccaccactgtcagc
gttgccgctggtgagttcgagctgcgcgccaagggtcgtatcctcaagttcgacggttac
acccgggtcatgccccaggtgagcaagccgggcgacgacgatgtgttgcccgacatggcc
cagggcgaagtcctgaaactgatcaagctggacccgagccagcacttcaccaagccgccg
gcgcgctactccgaagccagcctggtgaaggagatggagaagcgtggcatcggccgtcct
tcgacctatgcggcgatcatctccaccatccaggatcgcggttatgtgaccctgcacaac
cgtcgcttctactcggaaaagatgggcgacatcgttaccgaacgcctctccgaaagcttc
tccaacctcatggactacggcttcactgccggcatggaagagaatctcgacgacgtggcc
cagggcgagcgtgactggaagaacgtgctcgacgagttctacggcgacttcaagaacaag
ctcgaggtcgcggagggcgctgaaagcggtatgcgcgccaaccagccggtcatgaccgat
atcccatgcctgacctgcggccggccgatgcagatccgtacggcttccacaggcgtgttc
ctgggctgctcgggttatagcctgccgcccaaggagcgctgcaaggccacggtcaacctg
gttccgggcgacgagatcgcggcggacgacgagggtgagtccgagtccctggtactgcgc
ggcaagcatcgttgcccgatctgcagcacggcgatggacgcttacctgctggatgaaaag
cgcaagctgcatatctgtggcaacaacccggattgcgccggctatgagatcgaagagggc
agctaccggatcaagggctacgaaggcccgagcctggagtgcgacaagtgcggtagcgaa
atgcagctcaagaccggtcgtttcggcaagttcttcggttgcaccaatgcgacctgcaag
aacacccgcaagctgctcaagagcggcgatgcggcgccgccgaagatggatccggtgaag
atgcccgagctcaagtgcgagaaggtcaacgacacctatatcctgcgtgacggtgcatcg
gggttgttcctggctgccagccagttcccgaaaaaccgtgagacccgtgcaccgttggtg
ctcgagctgatcccgcacaaggacgagatcgatccgaagtatcacttcctgtgcgaggcg
ccgcagaaggatcctgatggccgtcccgcagtcgtgcgctatagccgcaagaccaaggag
cagtacgtgcagaccgaagtcgatggcaagcctactggctggcgcgctttctacgatggc
ggtagctggaagatcgaagacaagcgctga
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