KEGG   Pseudonocardia sp. EC080610-09: AD006_26245
Entry
AD006_26245       CDS       T04146                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pseq  Pseudonocardia sp. EC080610-09
Pathway
pseq02024  Quorum sensing
pseq03060  Protein export
pseq03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pseq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AD006_26245
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AD006_26245
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AD006_26245
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pseq02044]
    AD006_26245
Enzymes [BR:pseq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AD006_26245
Secretion system [BR:pseq02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AD006_26245
  Eukaryotic Sec-SRP protein
   AD006_26245
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW AAA_24 nSTAND3 Zeta_toxin AAA_22 APS_kinase ArsA_ATPase AAA_30 AAA_31 AAA_16 MMR_HSR1 AAA_18 6PF2K AAA_33 TsaE Thymidylate_kin AAA_26 MobB NTPase_1 Mod_r AAA_25 NACHT
Other DBs
NCBI-ProteinID: ALL77934
LinkDB
Position
complement(5694306..5695874)
AA seq 522 aa
MFDSLSERLGSTLRDLRGKGRLSDADIDATAREIRIALLEADVALPVVRGFIARIKERAK
GSEVSQALNPAQQVVKIVNEELVTILGGETRRLNLAKEPPTVIMLAGLQGAGKTTLAGKL
ARWLKGQGHTPLLVACDLQRPNAVNQLQIVGERAGVQTFAPHPGATGSGELPEGPGDPVG
VARGGIAHAREKQYDVVVVDTAGRLGVDEELMRQASDIRTAVDPDEVLFVVDAMIGQDAV
ATAEAFRDGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDVFHPDRM
SSRILGMGDLLTLIEQAEQVFDAEQSAAAAQKISSGELSLEDFLQQMMQLRKMGPIGNIL
NMLPGANQGQMKAALEQVDDKQIDRLQAIIRGMTPAERDDPKIINASRRQRIATGSGVTV
SDVNDLVNRFFEARKMMKQMAGQFGFGGGGRKATKKVPKNARKAKQAKKRRSGNPANRAG
QAGGPDLSNLPPSLQQLPPGLAGMDQLPPGFDPSTLDFGKKK
NT seq 1569 nt   +upstreamnt  +downstreamnt
gtgttcgactccctctccgagcggctcggatccacgctgcgtgatctccgcggcaagggc
cggctctccgacgccgacatcgacgccaccgcgcgcgagatccggatcgcgctgctggag
gcggacgtcgccctgccggtggtccgcgggttcatcgcgcgcatcaaggaacgggccaag
gggtcggaggtctcgcaggccctgaaccccgcccagcaggtcgtcaagatcgtcaacgag
gagctcgtgacgatcctcggcggcgagacgcggcggctgaacctcgccaaggaaccgccg
acggtcatcatgctggccggtctgcagggcgccggtaagacgaccctggccggcaagctc
gcgcgctggctcaaggggcaggggcacaccccgctgctggtggcgtgcgacctgcagcgc
ccgaacgcggtgaaccagctgcagatcgtcggcgagcgcgccggcgtgcagaccttcgcg
ccgcacccgggcgccaccgggtccggtgagctgccggagggccccggtgacccggtcggc
gtcgcccgcggcggcatcgcgcacgcccgcgagaagcagtacgacgtcgtcgtcgtcgac
accgcgggccgcctcggtgtcgacgaggagctgatgcgccaggcgtccgacatccggacg
gcggtcgacccggacgaggtcctgttcgtcgtcgacgccatgatcggtcaggacgcggtg
gcgaccgccgaggcgttccgcgacggcgtcggcttcaccggtgtcgtgctcaccaagctc
gacggcgacgcccgcggtggcgccgccctgtcggtccgcgaggtcaccgggcagccgatc
ctcttcgcgtcgaacggcgagaagctcgaggacttcgacgtcttccaccccgaccggatg
tcctcgcgcatcctcgggatgggtgacctgctcaccctgatcgagcaggccgagcaggtc
ttcgacgccgagcagtccgcggccgccgcgcagaagatcagctccggcgagctgtccctg
gaggacttcctccagcagatgatgcagctgcgcaagatggggccgatcggcaacatcctc
aacatgctcccgggcgccaaccaggggcagatgaaggccgcgctcgagcaggtcgacgac
aagcagatcgaccgcctgcaggcgatcatccgcggcatgaccccggccgagcgggacgac
ccgaagatcatcaacgcgtcccggcggcagcggatcgcgaccggctcgggcgtcaccgtc
tccgacgtgaacgacctggtcaaccgcttcttcgaggcccgcaagatgatgaagcagatg
gccggtcagttcggtttcggcggcggcgggcgcaaggccaccaagaaggtcccgaagaac
gcgcgcaaggcgaagcaggcgaagaagcgccgcagcggcaaccccgcgaaccgggccggg
caggccggcgggccggacctgtcgaacctgccgccgagcctgcagcagctcccgccgggg
ctcgccgggatggaccagctgccgcccggcttcgacccgtcgacgctggacttcggcaag
aagaagtga

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