Pseudomonas sp. TCU-HL1: THL1_1063
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Entry
THL1_1063 CDS
T05373
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pset03019
]
THL1_1063
03009 Ribosome biogenesis [BR:
pset03009
]
THL1_1063
Messenger RNA biogenesis [BR:
pset03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THL1_1063
Ribosome biogenesis [BR:
pset03009
]
Prokaryotic type
rRNA processing factors
THL1_1063
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AOE83611
UniProt:
A0A1B3E240
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Position
1151324..1152781
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AA seq
485 aa
AA seq
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MSEEILINITPMESRVAVVENGVLQEVHVERTLRRGIVGNIYKGKVVRVLPGMQAAFVDI
GLDRAAFIHASEISTREGSAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQLSIPSRY
LVYMPRTSHVGISLKIEDEAERERLKQVVADCIAAEGIEEAGGFILRTAADGARTDEILA
DIRYLRRLWEQISAQMQTAPAPSVIYEDLSLALRTLRDLVNPRIEKIRIDSRETFQKVTQ
FVDELMPEVADRLEHYPGERPIFDLYGVEDEIQKALERKVLLKSGGYLIIDPTEAMTTID
VNTGAFVGHRTLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHQRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLIQVLCEPCVSCQGRGLLKTAETICYEI
FREILREARAYQAEGYLVLANQKVVDRLLDEESGNVADLEAFIGRPIKFQVETMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagagattctgatcaatatcacgccgatggaatcgcgcgtggcggtggtggag
aacggtgtgctgcaggaggtgcatgtcgagcgcaccctgcgtcgcggcatcgtcggcaac
atctacaagggtaaggtcgtgcgggtgcttccggggatgcaggcggcgttcgtcgacatc
ggccttgaccgtgcagcattcattcatgcctcggagatcagcacccgcgaaggcagtgcg
gtggagagcatcagcgccctggtgcatgaaggccagagcctggtggtgcaggtcaccaag
gaccccatcggaagcaagggcgcgcgcctgaccacccagttgtcgattccctcgcgttat
ctggtgtacatgccgcgcaccagccatgtgggcatttccctgaagatcgaggacgaggcc
gagcgcgagcgcctcaagcaggtggtcgccgactgcattgccgccgagggcatcgaggaa
gccggcggtttcatcctgcgtacggccgccgacggcgcccgcaccgatgaaatcctggcc
gacatccgctacctgcgccgcctctgggagcagatttccgcgcagatgcagaccgctcct
gcgccctcggtgatttacgaggacctcagcctggcactgcgcacgctgcgcgacctggtc
aacccgcgtatcgagaagatccgcatcgattcccgcgaaaccttccagaaggttacccag
ttcgtcgacgaactgatgcctgaagttgccgatcgcctggagcactaccccggcgagcgg
ccgatcttcgacctgtatggcgtcgaagacgagatccagaaggccctggagcgcaaggtg
ctgctgaagtccggcggctacctgatcatcgaccccaccgaggcgatgaccaccatcgat
gtgaacaccggcgccttcgtcggccatcgaacccttgaagaaaccatcttcaagaccaac
ctcgaagccgccaccgccatcgcccgccagctgcgcctgcgcaacctgggggggatcatc
atcatcgacttcatcgacatggaagatgaagagcaccagcggcaggtgctgcggaccctg
gagaagcagctggagcgcgaccacgccaagaccaacatcatcggcatcaccgagctcggt
ctggtgcagatgacccgcaagcggacccgtgaaagcctgatccaggtgctctgcgaaccc
tgcgtcagttgccagggacgtggcctgctgaagactgcagaaaccatctgctacgaaatc
ttccgggagatcctgcgcgaggcccgcgcctatcaggcggaaggctacctggtgcttgcc
aaccagaaagtcgtggaccgcctgctggacgaagagtcggggaacgtcgctgatctggaa
gccttcatcgggcgtccgatcaagttccaggtggaaaccatgtactcccaggaacagtac
gatgtggtcctgctctga
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