Pseudomonas sp. TCU-HL1: THL1_3228
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Entry
THL1_3228 CDS
T05373
Name
(GenBank) Short chain fatty acid transporter
KO
K02106
short-chain fatty acids transporter
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THL1_3228
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Gene cluster
GFIT
Motif
Pfam:
SCFA_trans
DcuC
Motif
Other DBs
NCBI-ProteinID:
AOE85776
UniProt:
A0A1B3E894
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Position
complement(3426531..3427949)
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AA seq
472 aa
AA seq
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MATQLQESRSARFAMRCSNWAERWFPDSWVFAAVAILLVTVAALAMGAPASQAAKAFGDG
FWSLIPFTMQMAFVVIGGYVVASSGPASRLIDLLARVPKNGRSAVCWVALISMVASLLNW
GLSLVFGGLLVRALARREELKMDYRAAGAAAYLGLGAVWALGLSSSAAQLQANPASLPPS
ILAITGVIPFTETIFLWQSGVMLLALMVVSLVIAYMTAPSAASARDAKSCGVDPSFAAPQ
QVKPTRPGEWLEHSPLLIILLVVLAGGWLAQEFASKPAITAISGLNTYNLLFIMAGALLH
WRPRSFLDAVARAVPTTTGVLIQFPLYGSIAAIMTTVKGVDGETLAHHISTFFVQIANHD
TYALLMGVYSAVLGFFIPSGGGKWIIEAPYVMQVANELQYHLGWSVQIYNAAEALPNLIN
PFYMLPLLGVLGLKARDLIGFSFVQLLVHIPLVMVLLWGLGTTLTYVPPVMP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaacttcaagaaagccgctcagcacgctttgccatgcgttgctcgaactgg
gcggaacgctggttccccgattcctgggtctttgccgcagtcgccatactcctggtgacg
gtcgccgcccttgccatgggcgcgccggccagccaggccgccaaggcctttggcgacgga
ttctggagcctgatccccttcaccatgcagatggccttcgtggtcatcggcggctacgtg
gtcgccagttccggaccggcctcgcgcctgatcgacctgctggcccgcgtaccgaagaac
ggccgttcggcggtgtgctgggtggcgctgatctccatggtcgcgtcgttgctgaactgg
ggcctctccctggtgttcggcggcctgctggtgcgtgccctggcccgccgtgaagaactc
aagatggactaccgtgccgccggtgccgccgcctacctgggcctgggcgctgtctgggcc
ctaggcctgtcttcgtcggccgcgcagctgcaggccaacccggccagcctgccgccgtcg
atcctcgccattaccggcgtgattcccttcaccgaaaccatcttcctctggcagtcgggt
gtgatgctgctggcgctgatggtggtgtcgctggtgatcgcctacatgaccgcccccagc
gccgccagcgcgcgtgatgccaaatcctgtggcgtggacccgagcttcgccgcaccgcag
caggtcaagccgacccgtccgggcgagtggctggaacacagcccgctgctgatcatcctg
ctggtggtactggcaggtggctggttggcccaggagttcgccagcaagccggcgatcacc
gccatttccggcctgaacacctacaacctgctgttcatcatggctggcgcactgctgcac
tggcgtccgcgcagcttcctggatgccgtggcccgcgcagtgcccaccaccaccggggtg
ctgatccagttcccgctgtacggctccatcgccgcgatcatgaccacggtgaagggcgtg
gatggcgagaccctggcccaccacatctccaccttcttcgtgcagatcgccaaccacgac
acctacgcactgctgatgggtgtgtattcggccgtgctgggattcttcatcccgtctggt
ggcggcaagtggatcatcgaggcgccctacgtgatgcaggtggccaacgagctgcaatac
cacctgggctggtcggtgcagatctacaacgccgccgaggcgctgccgaacctgatcaac
cccttctacatgctgccgctgctgggtgtgctgggcctgaaggcccgcgatctgatcggc
ttctccttcgtccagctactggtgcacatcccgctggtgatggtgctgctgtgggggcta
ggaacgacgctgacgtatgtgccgccggtaatgccgtaa
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