Pseudomonas sp. TCU-HL1: THL1_728
Help
Entry
THL1_728 CDS
T05373
Name
(GenBank) DNA-directed RNA polymerasesubunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THL1_728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pset03021
]
THL1_728
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_728
Enzymes [BR:
pset01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THL1_728
Transcription machinery [BR:
pset03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THL1_728
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THL1_728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF22
Motif
Other DBs
NCBI-ProteinID:
AOE83276
UniProt:
A0A1B3E150
LinkDB
All DBs
Position
789996..790997
Genome browser
AA seq
333 aa
AA seq
DB search
MQSSVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLSLSKKGSGVVTAADIQLDHD
VEIVNGDHVIANLADNGVLNMKLKVSRGRGYEPADARQSDEDESRSIGRLQLDASFSPVR
RVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQHQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcggtaaatgagttcctgaccccccgccatattgatgtgcaggtggtcagt
ccgacccgcgccaagattacgctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgctgcgtcgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgaa
atcgacggcgtactccatgagtacagcgccatcgagggtgttcaggaagatgtcatcgag
atcctcctgaacctcaaaggtctggctatcaagctgcatggtcgtgacgaagtaacgctg
agcctttccaagaagggctcgggcgtggtcactgccgccgatattcagctggatcatgat
gtcgaaatcgtcaacggcgaccacgtaatcgccaatctggcggataacggcgtgctgaac
atgaagctcaaggtgtcccgcggtcgtggctatgagcccgccgacgcgcgccagagcgac
gaagacgagagccgcagcattggtcgtttgcagctcgatgcctcgttcagccccgtccgt
cgtgttgcttacgtggttgaaaacgcccgtgtcgagcagcgtaccaacctggacaagctg
gtcattgacctcgaaaccaacggcaccctggaccctgaagaggccatccgtcgtgccgct
accatcctgcaacaccagctggctgcgttcgtcgacctgaagggcgacagcgagccggta
gttgttgagcaggaagacgagatcgatccgatcctgctgcgtccggttgatgacctcgag
ctgaccgtacgttcggccaactgcctcaaggcggagaacatctactacatcggcgacctg
attcagcgcaccgaagtagagctgttgaagactccgaacctgggcaagaagtccctgacc
gagatcaaggacgtcctggcctcccgtggtctgtccctcggcatgcgcctcgacaactgg
ccgccggcaagtctcaagaaggacgacaaggcgactgcctga
DBGET
integrated database retrieval system
