KEGG   Pseudanabaena sp. PCC 7367: Pse7367_2741
Entry
Pse7367_2741      CDS       T02369                                 
Name
(GenBank) Ribocuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pseu  Pseudanabaena sp. PCC 7367
Pathway
pseu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pseu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Pse7367_2741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pseu03019]
    Pse7367_2741
Messenger RNA biogenesis [BR:pseu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Pse7367_2741
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 DNA_pol_delta_4
Other DBs
NCBI-ProteinID: AFY70996
UniProt: K9SM01
LinkDB
Position
3453828..3455663
AA seq 611 aa
MAKKSDSPALKIIPLGGLKEIGKNTWVFEINDEIMLLDGGLGFPGDGMHGVNIVLPDMTY
LRQNRHKIKGMVVTHGHEDHIGGIAFHLRQFDIPVIYGPRLGMALLEGKLREAGVLNRTE
LRTVGPRDVVRVGNNFFVEFIRNTHSMADSFTVAINSPAGLVIHSGDFKVDHTPVDGEFF
DFQRLAEHGEKGVLCLISDSTNAEVPGHTPSERAVAPGLERAFASAKGRVFVTTFASSVH
RLNIILELAEKMGRVVGVVGRSMLNVIAHARNLGYVKCRDELLQPLQNLRKYRDDQILIL
TTGSQGESMSALTRMAEGRHRQLQIREGDTVVFSANPIPGNVIPVVRTVDKLMNLGANVI
YGKDKGIHVSGHGAQEDQKLMLSLTRPKFFFPAHGEYRMLRKHASMAEAMGVPGENIVIA
ENGDVIQVSQDGIGVADKVPSGIELVDASREGVVDGEVLRDRQTIAGDGIITVAASINLE
GKLVTKPDVRLSGVVLPMEMSRLTNFIIDAIDETLSNQWAKHARDLGEIEVDWTGLRYQI
ERDINRKLRSQMQSRPMLVVLLQTPEGEDATSNGKKSGKSKSSAKNAKDAKDDKTTTPAA
GKRKRATASVS
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggcgaagaaatcagattcaccagccctcaagattattcccttgggcggattgaaggaa
attggtaagaatacctgggtatttgaaatcaacgatgaaatcatgctcctagatggaggt
ctaggcttccctggtgatggtatgcatggggtgaatattgtgttgcccgatatgacctac
ctgcgccaaaatcgccacaagatcaaaggcatggtggtgacccacggtcatgaagaccat
atcggtgggatcgccttccatctgcgccaatttgatattccagtgatctatggccccaga
ctggggatggccttactagaaggcaaactcagagaagcgggggtattgaatcgcactgaa
ttacgcaccgttggtccccgcgatgtggtgcgggttggcaataacttctttgtggagttc
attcgcaatacccactcgatggctgatagctttaccgtggcgatcaatagtccggctggt
ttggtaattcattccggtgatttcaaggtagaccacacgccggttgatggcgaattcttt
gatttccagcgactagcagagcatggtgaaaagggtgtgctgtgtttgattagtgattcc
actaatgccgaagtgccaggacataccccatcggaaagagcggtagcccctggtttggaa
cgtgcgtttgccagcgccaagggacgtgtgtttgtgactacgtttgcctcttcggtgcat
cgcctgaatattattctcgaattggctgagaaaatgggtcgtgtggttggcgtagtcggc
cgatcgatgctaaatgtgatcgcccatgcccgcaatctaggttatgtcaaatgccgcgat
gaattgttgcagccgttgcagaatcttaggaaatatcgggatgatcagattctgattttg
accactggttcccagggtgaatcgatgtcagcgctgacccgcatggctgaaggcagacac
cgccaattgcaaatccgcgaaggtgatacggtggtattttccgccaatccaattcctggc
aatgtaattccggtggtacgcacggttgataagctgatgaacctgggtgcgaatgtgatt
tatggtaaagacaagggcattcacgtttctggacatggcgcgcaggaagaccaaaaacta
atgctcagcctgaccagacctaagttcttcttccctgcccacggtgaatatcggatgttg
aggaaacatgccagcatggcagaagcgatgggagttccaggcgagaatatcgttattgct
gagaatggcgatgtgattcaggtcagccaggatggtattggtgtggctgataaggtgcca
tcgggaatcgaattggtagatgcctcccgcgaaggggtggtggatggcgaagtgttgcgc
gatcgccagaccattgctggtgatggcattatcaccgttgctgcttccattaatttggaa
ggcaagttggtaaccaaaccagacgttcgcctgagtggtgtagtgctgccaatggaaatg
tcacggttgaccaatttcattatcgatgcgatcgatgaaacgctcagtaatcaatgggct
aagcatgcccgtgatttgggtgagattgaagtagattggacaggactgcgctatcaaatt
gagcgcgatattaatcgcaagttgcgatcgcagatgcaaagccgccctatgctggtggtg
ttgctgcaaactcctgaaggtgaggatgcaaccagtaatggtaaaaaatccggcaagtct
aaatcgagtgctaagaatgccaaggatgccaaggatgataaaacaactacgcctgcggct
ggcaagcgcaaacgtgctactgcttctgtttcctag

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