Pseudanabaena sp. PCC 7367: Pse7367_2741
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Entry
Pse7367_2741 CDS
T02369
Name
(GenBank) Ribocuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pseu
Pseudanabaena sp. PCC 7367
Pathway
pseu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pseu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pse7367_2741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pseu03019
]
Pse7367_2741
Messenger RNA biogenesis [BR:
pseu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pse7367_2741
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
DNA_pol_delta_4
Motif
Other DBs
NCBI-ProteinID:
AFY70996
UniProt:
K9SM01
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Position
3453828..3455663
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AA seq
611 aa
AA seq
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MAKKSDSPALKIIPLGGLKEIGKNTWVFEINDEIMLLDGGLGFPGDGMHGVNIVLPDMTY
LRQNRHKIKGMVVTHGHEDHIGGIAFHLRQFDIPVIYGPRLGMALLEGKLREAGVLNRTE
LRTVGPRDVVRVGNNFFVEFIRNTHSMADSFTVAINSPAGLVIHSGDFKVDHTPVDGEFF
DFQRLAEHGEKGVLCLISDSTNAEVPGHTPSERAVAPGLERAFASAKGRVFVTTFASSVH
RLNIILELAEKMGRVVGVVGRSMLNVIAHARNLGYVKCRDELLQPLQNLRKYRDDQILIL
TTGSQGESMSALTRMAEGRHRQLQIREGDTVVFSANPIPGNVIPVVRTVDKLMNLGANVI
YGKDKGIHVSGHGAQEDQKLMLSLTRPKFFFPAHGEYRMLRKHASMAEAMGVPGENIVIA
ENGDVIQVSQDGIGVADKVPSGIELVDASREGVVDGEVLRDRQTIAGDGIITVAASINLE
GKLVTKPDVRLSGVVLPMEMSRLTNFIIDAIDETLSNQWAKHARDLGEIEVDWTGLRYQI
ERDINRKLRSQMQSRPMLVVLLQTPEGEDATSNGKKSGKSKSSAKNAKDAKDDKTTTPAA
GKRKRATASVS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaatcagattcaccagccctcaagattattcccttgggcggattgaaggaa
attggtaagaatacctgggtatttgaaatcaacgatgaaatcatgctcctagatggaggt
ctaggcttccctggtgatggtatgcatggggtgaatattgtgttgcccgatatgacctac
ctgcgccaaaatcgccacaagatcaaaggcatggtggtgacccacggtcatgaagaccat
atcggtgggatcgccttccatctgcgccaatttgatattccagtgatctatggccccaga
ctggggatggccttactagaaggcaaactcagagaagcgggggtattgaatcgcactgaa
ttacgcaccgttggtccccgcgatgtggtgcgggttggcaataacttctttgtggagttc
attcgcaatacccactcgatggctgatagctttaccgtggcgatcaatagtccggctggt
ttggtaattcattccggtgatttcaaggtagaccacacgccggttgatggcgaattcttt
gatttccagcgactagcagagcatggtgaaaagggtgtgctgtgtttgattagtgattcc
actaatgccgaagtgccaggacataccccatcggaaagagcggtagcccctggtttggaa
cgtgcgtttgccagcgccaagggacgtgtgtttgtgactacgtttgcctcttcggtgcat
cgcctgaatattattctcgaattggctgagaaaatgggtcgtgtggttggcgtagtcggc
cgatcgatgctaaatgtgatcgcccatgcccgcaatctaggttatgtcaaatgccgcgat
gaattgttgcagccgttgcagaatcttaggaaatatcgggatgatcagattctgattttg
accactggttcccagggtgaatcgatgtcagcgctgacccgcatggctgaaggcagacac
cgccaattgcaaatccgcgaaggtgatacggtggtattttccgccaatccaattcctggc
aatgtaattccggtggtacgcacggttgataagctgatgaacctgggtgcgaatgtgatt
tatggtaaagacaagggcattcacgtttctggacatggcgcgcaggaagaccaaaaacta
atgctcagcctgaccagacctaagttcttcttccctgcccacggtgaatatcggatgttg
aggaaacatgccagcatggcagaagcgatgggagttccaggcgagaatatcgttattgct
gagaatggcgatgtgattcaggtcagccaggatggtattggtgtggctgataaggtgcca
tcgggaatcgaattggtagatgcctcccgcgaaggggtggtggatggcgaagtgttgcgc
gatcgccagaccattgctggtgatggcattatcaccgttgctgcttccattaatttggaa
ggcaagttggtaaccaaaccagacgttcgcctgagtggtgtagtgctgccaatggaaatg
tcacggttgaccaatttcattatcgatgcgatcgatgaaacgctcagtaatcaatgggct
aagcatgcccgtgatttgggtgagattgaagtagattggacaggactgcgctatcaaatt
gagcgcgatattaatcgcaagttgcgatcgcagatgcaaagccgccctatgctggtggtg
ttgctgcaaactcctgaaggtgaggatgcaaccagtaatggtaaaaaatccggcaagtct
aaatcgagtgctaagaatgccaaggatgccaaggatgataaaacaactacgcctgcggct
ggcaagcgcaaacgtgctactgcttctgtttcctag
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