Paracoccus seriniphilus: JHW44_00220
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Entry
JHW44_00220 CDS
T08801
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psew
Paracoccus seriniphilus
Pathway
psew03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JHW44_00220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psew03400
]
JHW44_00220
Enzymes [BR:
psew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JHW44_00220
DNA repair and recombination proteins [BR:
psew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JHW44_00220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WCR13953
LinkDB
All DBs
Position
44926..45711
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AA seq
261 aa
AA seq
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MFTLATWNINSVRLREGLVARLLKEEAPDVLCLQECKSPVDKIPTEMFSQLGYHHMVARG
QKGYNGVAILSRLPITDAGERDYAKLGHARHVAARMENGVVIHNMYIPAGGDVPDREVNE
KFGQKLDFVSEMRDVFHADKPARSIMVGDFNIAPREDDVWSHKKLLKIVSHTPIEVEHLL
AAQDAGDWVDVTRKDIPEGQLYSWWSYRARDWDAADKGRRLDHIWATGDIANAAHGSRIL
RDARGWEKPSDHAPVFASFDL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttcacactcgccacctggaacatcaactcggtccgtctgcgcgaagggcttgtcgcc
cggctgctgaaggaagaagcacccgatgtcctctgccttcaggaatgcaaatcgccggtc
gacaagatccccaccgagatgttcagtcagctaggctatcaccacatggtggcacgcggc
caaaagggctataatggcgtcgccatcctctcgcgcctgcccatcaccgatgcgggcgaa
cgcgactatgccaagctgggccatgcccgccatgtcgccgcgcggatggaaaacggcgtg
gtgatccacaatatgtatatcccggcaggcggagatgttcccgaccgcgaggtgaacgag
aaattcggacagaagctggatttcgtgtccgagatgcgcgacgtgtttcacgccgacaag
cccgcgcgctcgatcatggtcggtgatttcaacatcgccccgcgcgaggatgatgtctgg
tcgcacaagaaattgctgaagatcgtcagccacacgccgatcgaggtggagcatctgctt
gccgcccaggacgcgggcgactgggtggatgtgacccgcaaggacattcccgaaggccag
ctctattcctggtggagctatcgtgcccgcgactgggacgcggccgacaagggccggcgg
ctggatcacatctgggccaccggcgacatcgcaaatgccgctcatggcagccggatcctg
cgcgatgcgcgcggctgggaaaagccaagcgatcatgccccggtctttgccagctttgat
ttgtag
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