Polypterus senegalus (gray bichir): 120517540
Help
Entry
120517540 CDS
T08668
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psex03016
]
120517540 (tsen54)
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
120517540 (tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
120517540
NCBI-ProteinID:
XP_039595869
LinkDB
All DBs
Position
17:91580503..91611555
Genome browser
AA seq
531 aa
AA seq
DB search
MAEAEERSAVDSGGAWTDELLSPSELFSVRTRDHKIPTRGQKEFLYDGSEEQVERLQCSL
GEHWKLLSEERVERQGSLVKAEWKPEDVTVALKTPAGKFWQTMGYADEGKQFLLPEEALF
LMECGSVEVFYRDLPLSIQEGYELLLGDKTISLLEYLVFSHLKRLGYIVNRFDSSAVPSV
YERRLNLVHKREKQSKQQRKRKRSVSASRSNDISEGQPDSQDVQNRREKAGDDAFMEGTS
SDSQKAVGMNYFSSSAVSSEEECHELPSNSEQKRPDWWEKKLEEAPSPGRPVYSKQSAGK
CDLNKVLFPNLGRDCLHTNLEVPDACLLPSNVTATACDISSWREKLNMRQMRLTRREREE
LEKKKKYKRGVNEDKEVRACKNWQEYKQLLERRSQSSSKQRPAHLWNDVICPLVTPGQVS
STGDLLQQISVMQASHLVDDAVGLVEDACDKRITFDVYQADTAFDFKKSDPGKPYSRISV
CSFEDPVPSLHTLKRLAQQSGDVPVTFAVVDNGDISFYSFKDFWLPTDVWQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggaggagcgaagtgccgtcgacagtggcggcgcgtggactgacgaattg
ctgagcccttctgaactgttttcagtccgaacacgagaccacaagattcctactcgtggc
cagaaggaatttctatatgatgggtcagaggagcaggtagaaagactgcaatgtagcctg
ggagaacactggaaactgctctcagaggagcgggttgagagacaaggcagccttgtgaaa
gctgaatggaaacctgaggatgttacagtggcgctgaagactcctgcaggtaaattctgg
cagacaatgggctatgctgatgaaggaaagcagtttctcctgccagaggaagccctgttc
ctaatggaatgtggaagcgtcgaggtgttttacagggatttgcctctgtccatacaagaa
gggtatgagctgctgttgggtgacaagaccatctccttgctagagtacctggtgttcagc
catttgaagagactgggttatatagtgaacagatttgattcaagtgctgttccttccgtt
tatgagagacgactaaacctggtgcacaagcgtgaaaagcagagcaagcagcagcgcaaa
cggaagagaagtgtcagtgccagcaggtcgaatgatatttcagaaggccagccagatagc
caagatgttcaaaacagaagggaaaaagcaggtgatgatgctttcatggaaggcacttcc
agtgattctcaaaaagcggttggcatgaactatttctcctcttcagcagttagcagtgag
gaagagtgccatgagttgccttcaaattctgagcaaaaaaggccggattggtgggaaaaa
aaattggaggaagcaccaagtcctggcagacctgtttattctaagcagtcggctggcaaa
tgtgacttaaacaaagtgcttttcccaaaccttggccgagactgtcttcacaccaacctt
gaggttcccgacgcctgcttactgccaagtaacgtgactgccacagcttgtgacatttct
tcctggcgggagaagctaaacatgcgacagatgcggcttacaaggcgggagagggaagag
cttgagaaaaagaagaagtacaagagaggagtgaatgaagacaaggaggttcgggcctgc
aagaactggcaggaatacaagcagctattggagaggcggagtcagagcagctccaaacaa
cggcccgcccatttgtggaacgatgtcatctgtccacttgtgactccgggacaggttagc
tcaacaggtgatcttctgcagcaaatcagtgtcatgcaagcatcccacctggttgatgat
gcagtaggacttgtggaagacgcttgtgacaaaaggatcacttttgatgtttaccaagca
gatacagcatttgatttcaagaaatcagacccggggaaaccttattctaggatatctgtc
tgcagctttgaagatcccgtaccaagtctgcacaccttgaaaagacttgcacaacagagt
ggcgatgtcccggtgacctttgctgtggtggataatggagatatttctttttattctttc
aaagatttttggcttcccacagacgtctggcagtga
DBGET
integrated database retrieval system
