Polypterus senegalus (gray bichir): 120525561
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Entry
120525561 CDS
T08668
Symbol
col10a1b
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
psex
Polypterus senegalus (gray bichir)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
120525561
NCBI-ProteinID:
XP_039603895
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All DBs
Position
3:complement(134331390..134345108)
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AA seq
664 aa
AA seq
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MEVRITAVFLLLLSLCMEYGGAHYTKKVQLKGPPPYGGYNVKGHVYEMKGEQGPPGEPGE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NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggaagtacggataacagctgtgtttttgctactgctctccctgtgcatggagtatgga
ggtgcacattacaccaaaaaagttcaactaaagggaccacccccatatggtggatataat
gtaaagggtcacgtgtacgagatgaaaggagaacaaggaccaccaggagaaccaggagaa
ccaggagaacaaggagaacaaggagaacaaggaccagctggaccaccagggcctccagga
aaatctggctatggggtaccaggtgcacaaggaccccctggaccacaaggacctccagga
cagtctgccgtaggaaaaccaggaattcctggtagtccaggaaagccaggtgaacctggg
gccccaggagaaaaaggagagaggggaagccaaggaagttcaggtcctagagggtcacca
ggatcaccaggctctccgggaccagctggtttatctagtactggtaagcaaggaccccag
ggcttaccaggtccatcagggcctagaggtgaaccgggacaaaagggtcatccaggtatt
caaggtgcacaaggtcccaaaggagaacaaggatatggaatacctggaaaaccaggggag
agaggtcctgagggcccagcagggccaatgggcatgactggtcctgcaggtgttggaaaa
ccaggtagacctggccatccaggtgagccaggcaaacaaggagcgcaaggtgccgatgga
gctcccggtcccatgggaatgacaggccctaagggtccacctggaccatctgggccaatg
ggtattggaaagtcaggagctgatggtgctccaggtttgcctggcgcaactggacctaag
ggtccacctgggccacctgggcagaatggaagtccaggtgctccaggatacggaaaaact
ggtgcaacagggcctaaaggagaaagaggggcaacaggagcaacaggtgcaacaggtgag
aaaggagaggcaggtgaggcaggagagccaggtgaggcaggagagcaaggggcagaggga
cctgctgggcctcaaggtgaaagagggcctcaaggtgaaactggagcaacaggtccaaag
ggtgaaagtggtcctgcggggccaagtggtccaaagggatataagggtgatccaggtaca
ccagggtctgatggaaaaccaggttactcaggaccaccaggccctgtaggaccacgagga
gcacagggcgcaaatggcgtgaagggagaaacaggaccagctggagcaccaggaacccca
ggagaagcaggcctaccaggtgccaaaggaaataagggtgatgcaggagaacctggagac
aaaggagcagatggaccaccaggtcccagaggacctagtggcctacctggatctgctggc
ttacctggccaaaagggtcaccctggtgctcctgggaaacctggtccagctggaatagca
gcaaaagcaattccaggtccaatgggaccacctgggcttccaggccagagaggagcagat
ggtcagccagggcaacctggaccacctggacaaccaggtcccccaggagaagaatattat
ggaaaaggaaagtcagaacagattgtagcagcacctgctcccctttctgctttcagtgcc
ctgttaaccaaagcctatccagaatctgggagccccattcagtttgagaatatcctgtac
aatgagcaacaccattatgacccttcttctggcatcttcacatgccaaattccaggggtc
tattattttgcttaccatgtgaacgcaaagggatctaatgtttgggttggcttgtataaa
aatggttctccagttatgtacacatatgatgaatatcagaaaggctacatggaccaagcc
tcaggaagtggtatcctttaccttcatgaaaatgaccaggtatgggtccaaattccaaat
gatgaatctaatggtgtctatgcttcagaatatgttcactgctctttctctggattccta
attggctcaacgtga
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