Polypterus senegalus (gray bichir): 120529798
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Entry
120529798 CDS
T08668
Name
(RefSeq) rho GTPase-activating protein 21-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120529798
Membrane trafficking [BR:
psex04131
]
Endosome - Golgi transport
Others
Others
120529798
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120529798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
120529798
NCBI-ProteinID:
XP_039609872
LinkDB
All DBs
Position
5:198420391..198828991
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AA seq
2090 aa
AA seq
DB search
MCDSSSVELSCSPPKENCRWTALIGVECCLPEPSCLWLKLLARANRGELDLGFSCTDSTP
LSKSTPTCKKLFSGCRTKQKDVQEQSEVASLVDEEQFSWPGPKTIRLHRTSHGFGFTLRH
FIVYPPESAVHSSMKQDEENGNRGRQKSRLEPMDTIFVKQVKEGGPAHEAGLCTGDRIVK
VNGESIIGKTYSQVIALIQNSDTVLDLCVMPKDEDILQLFSKDIAALAYSQDAYLKGNEA
YSGNARNIPDPPPICYPRIDAKAPAMAEAPNLTSSPETTLETLKNSNGGGRTAWSGATVA
GQHELGYRMEIPVPPSPTQVPKTQTAVCVFNESVRTVVVPGDKVVDHSTRVSRSVPAHRT
EEIRYNQAPEKMGVTKVRTRSSAGSASTSGQLQFAPIRPAESNKFTSSGQPVNFVTSSEG
HLSRPPHTAANDHFLITSNHYSPSSSTSPASHQNIDWRTYKTYKEYVENKRFHMYGCRTI
QERLDSLRAASQNTTDYKQAMLSSGSHGAGNPQVRRRSTSHDRAYQTSASVPVRYRSVSQ
ERLGGGGSDSVPHLKDWPRSASQDALTTPAVGTQNPRAHSCDYLGRQADTPPGDSFTSGR
LVERQGYSRAEHEERHHPPPPPHCDGTWQPMRQQLGQRVVPLARRTPSFAAPPVGGFSSE
RISNIGTRGISNSSHFPKPIDHPRPFRDFASHREDSQSRPSSLAERPYRVMVKNSAPDPS
LYAPASSPTFGQSVSGPDVLKDQRIVASNHMSRVVQHQQPQARADHVLDHGMDAGIDPRC
SKSAGPAKVLAHSTPGKPLSPLQQQQCLSTSSTNGVMFVQNKIRDSSEKINSKEMAHGEE
TTAVVLREKPPSGRPTPQPLRHQSYIMAVANPEAEPVPDSTCWLPNDARREVNMKRLGEQ
RKASNSSPPDDSLASIPFIDEPSSPSVDHDITHIPASAVISVSPAITASPPSPTPVIRRQ
LSHDQDSLRISISESQPVTKTERSKSYDEGLDNYREEGRSRSSIKHVSSLKGLKKALDGQ
KSTEDSGSRRNSSLDVFSDATKDGWLHFRQLNTEKTKRVGGSMRPWKHMYAVLRGPSLYL
YKDKKDLLTQGSAATEEDQQIISIKACLIDISYSDTKRKNVLRLTTSDCEYLFQAEDRED
MLSWIRVIQENSNLDEESAGVTSTDLISKKIKEYNTILSSSSSKTEPSPKTPRQSLSIRQ
TLLGTKGEPKAHSPHSPKQDSERKLLSKDDTSPPKDKGTWRKGIPSLVRKTFEKKPPPGV
TFGVRLDDCPPALTNKFVPLIVEICCNLVEERGLEYTGIYRVPGNNAAISNMQEELNRGM
DDIDVLDDKWRDLNVISSLLKSFFRKLPEPLFTNEKYSDFIDANRTEDPVERLKTLKRLL
YELPEHHFETLKFLSAHLKTVAENSEKNKMEPRNLAIVFGPTLVRTSEDNMTHMVTHMPD
QYKIVETLIQHYDWFFTEEGIEDPMTPVQQESAVDSQPVPNIDHLLTNIGRTGVSPGDVS
GNFIGPDTLWDSATSDSAKSKGSWGSGKDLYTKELIVSSFFAAASRKRKKHKEKPQPSSS
DDELDNVFLNKEPSNQGDNPNGPFDGAGKANVDGDCGVRDSHGSRADNTSSQQKTRGKLD
NKSTFVVGEKVPSGQPSPSPSPKCTHSPGLSYRLQTLVKTSLSDSPSQFDDAVSDLGTLN
STSSQASIQGTRHRKWTTPETKGNEFIMAEISSITSDYSTTSSMTYLTGMESSLLSPEAR
SVAESRGDEADDEQSELVSEGRPMETDSESEFSVFAASLAPGRVLCDAFHDKEQQSRRGS
AGSELTGTEGSTTPKLESHRAFKSHKLIECDTLSRKKCVRQKTDSESSAEIRSDKEANKL
SKIMEVMKKGTSTGSLPSTSKSEVEKTEAAWHLKISERLKFRLKASADDMFGVGMQKNSS
AEVRKKKSIRRRHTMGGQRDFAELAVLNNWSEQEAANGDKELELSAVDRLKPKCHSQDLS
IREWIARERFRTSNPEANDDSTADQLAVDQGEGPKPGLPLSVREGTGSSSSLTPGTRPSP
LASPSPMSADQLNGDNVQNKNKTNLSLVVDAHPQKLSGTQVVRSRFYQYL
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacagcagctcagtggagttgagctgcagtccccccaaggagaattgcagatgg
acagctcttattggcgtggagtgctgtttgcccgagcccagctgcctctggcttaaatta
cttgctagagcaaatcgaggagaactggatttgggcttcagttgtacagacagcacacct
ctgagcaagtcgaccccaacttgcaagaagttgtttagcggctgcaggacaaagcaaaag
gatgtacaagagcaaagtgaagtggcttcacttgtggacgaagagcaattctcatggcca
ggccccaagaccattcgactgcatcggacctctcacggctttggatttactctacgccac
ttcatagtctaccctccggagtcagctgtccattcatctatgaagcaggatgaagagaat
ggcaatagagggagacaaaagagtcggctggaacccatggacaccatctttgtaaagcaa
gtgaaagaaggtggacctgcacatgaagctggactttgcactggtgacaggattgttaaa
gtgaatggtgaaagtatcattgggaagacctactcacaagtaatagccttaattcaaaac
agtgacactgtccttgatctgtgtgtaatgccgaaagatgaagacattctgcagctgttt
tcaaaggatatcgcagctctggcatactctcaggatgcttaccttaaaggcaacgaagcc
tacagcggcaatgcccgtaacatacccgatccaccacctatatgttaccctcggatagat
gctaaagccccagccatggctgaagcccctaacctcacttcttccccggaaactacactg
gagaccctgaaaaacagcaatggtgggggtagaacagcatggtctggggctacagtggca
ggacagcacgagcttggctaccgtatggagattccagtccctccctcgcccacccaggtt
ccgaaaactcagactgcagtgtgtgtgttcaatgagagcgttcgaacggtcgtcgtccca
ggcgataaagttgtcgaccatagtactcgggtcagccggtctgttccagcacacagaacg
gaggaaattcggtataaccaggccccagaaaaaatgggagttacaaaagtgaggacgaga
tcttcagcaggatcagcgtcaacaagtggacagttacaatttgccccgatacggcctgcg
gaaagcaacaagttcacctccagtggtcagcctgttaattttgtcacctcctctgaagga
cacctgagtagaccacctcatacagctgctaatgatcactttttgattacatccaatcac
tactccccctcttcctctacctccccagcttcccatcagaacatcgactggcgcacatac
aaaacctataaggagtacgttgagaataaacgcttccacatgtatggatgccgcaccatc
caagaaagactggacagcctgcgggcagcctcccaaaacactacagactacaaacaggcg
atgctttccagtggctcccatggagctggcaacccacaggttcgcaggaggagcacctct
catgaccgtgcttaccagacctctgcatcagttcccgttcgttaccgcagtgtctcacag
gaacgacttggaggtggaggaagtgacagtgtcccacatctcaaggactggccaaggagt
gcttcccaggatgccttgactactccagctgttggaacccagaacccccgcgctcactct
tgtgactacctgggaagacaggctgatacaccaccaggagacagctttacctcagggcgg
ctagttgaaaggcaaggctacagcagggcagagcatgaagaacgacaccatcctcctcct
cctcctcactgtgatggcacttggcagcccatgagacagcaactaggacaaagggtagtt
cctttggctcgaaggacccccagctttgccgccccacctgtcggtggatttagcagtgaa
aggattagcaacatagggactcggggtatttctaattcttcccattttccaaaacccatt
gatcacccgcgtcctttcagagactttgcctcccacagagaggacagtcagtctcgtcca
tcctctttagctgaaagaccttatcgtgtgatggtaaaaaactctgcccccgatccttca
ttgtatgctcctgcttcatctccaacttttggacagagtgtcagtggacctgatgtgctg
aaagaccaaagaatcgtggcatctaatcacatgtcacgggttgttcagcaccagcaacct
caggctcgagcagaccacgttctagaccacggaatggatgctgggatcgatccacgttgc
tctaaatcagctggaccagcaaaagtcttggcacactccactcctggcaaacccttaagc
ccacttcagcaacagcagtgcctctctacctcttccaccaatggtgtaatgtttgtgcaa
aacaaaatcagagactcctctgagaagattaacagcaaagaaatggcacacggtgaggag
actacggcagtagtcttgagggaaaaacctccttctgggagacccactccgcagccactg
aggcaccagtcctacatcatggctgtggcaaatcctgaagctgagccagttccagattcc
acctgctggttacctaatgatgcccgccgagaggtcaacatgaagcgcctgggtgagcaa
aggaaagcatccaactccagtccacctgatgactccttggcttcgattccatttattgat
gagccctccagtccaagcgtggatcacgatatcacacacattccagcctctgctgtgatt
tctgtatcaccagccataactgcaagtccccctagtccaactcctgtcattcgacggcag
ctctctcatgatcaagattcccttcgaatcagcatttctgaatcccagcctgttacaaaa
acagagcgctcaaagtcatacgatgaagggttggacaattatagagaagaagggagatca
cgatcctccattaaacatgtgtccagtctgaaagggttgaagaaggctctcgatggccaa
aaatccacagaagactctggttccagaaggaattcctcattagacgtcttcagcgatgca
acaaaagacggttggcttcactttcggcagctcaacacagaaaagaccaagcgtgttggt
gggagcatgaggccatggaagcacatgtatgctgtactcagggggccatcgctctatctt
tacaaagataagaaggatcttctgacacaaggatctgctgccactgaagaagatcagcag
ataatcagcatcaaggcctgtctgattgatatctcctacagtgatactaagcgcaaaaat
gtgctgaggctcaccacctcggactgcgagtatctgttccaggctgaggatcgggaggat
atgctgtcatggattagggtcatacaggagaacagcaatttagatgaagagagtgcaggt
gtaactagtacagatctaataagcaaaaagataaaggagtacaatacaatactgagttct
tccagcagtaaaactgagccatcccccaaaaccccccggcagtccctcagcattagacaa
acgttacttggaactaaaggagaaccaaaggcccatagtccacactcgccaaagcaggat
tcagaacgcaagctcctaagcaaagatgacacaagtccgccaaaggacaaaggcacctgg
cgcaaaggtatccctagtctggtgagaaaaacctttgagaagaagcctccacctggtgtg
acttttggagttcggcttgatgactgtcctccagcacttacaaacaaatttgtgcctcta
atagttgagatctgctgtaatctggtggaggaaagaggtctagaatatacagggatctat
cgagttcctggaaacaatgctgctatttccaatatgcaagaagagcttaaccgaggaatg
gatgacattgacgtactggatgataaatggagggacctgaatgttatcagtagtttgctg
aaatcctttttcaggaagcttcctgaaccccttttcacaaatgaaaaatattcagatttt
atagacgctaacagaactgaagatcctgtggaaagacttaagaccctcaagaggcttctc
tatgagttaccagaacatcattttgagacgctcaagtttctttctgcccacttgaaaact
gttgctgaaaactctgaaaaaaataagatggagccccgaaatctggcaatagtgtttgga
ccaacacttgtaaggacatcagaagataacatgactcacatggtcacgcacatgccagac
cagtacaaaatagtcgaaactcttattcagcattatgactggtttttcacagaagaagga
attgaagacccaatgactccagtccaacaagaatcagctgttgattctcaacctgtacca
aacatcgatcatttgcttaccaacataggaagaacgggtgtgtcccctggcgatgtatca
ggtaacttcattggacctgatactctatgggattctgctactagtgactctgccaaatct
aagggttcttggggatctggaaaggatctttacactaaagagctgatagtgtcgtccttt
ttcgccgctgcaagccgtaagcgcaagaaacacaaggagaagccacaaccaagcagctcg
gatgatgagttagacaacgtctttctaaataaagagccttcgaatcagggagacaatcca
aatgggccttttgatggagcaggtaaagctaatgtggacggagactgtggcgtgagggac
agtcatggatccagagcggacaacaccagttctcagcaaaagactagagggaaacttgat
aacaaaagcacctttgttgttggagaaaaagtgccttcagggcaaccttctccatcgccc
agcccaaaatgtacccactcgccaggccttagctacaggctgcagacactggtgaagacc
tcactgtctgactccccatcacagtttgatgatgcagtgtcagatttgggtacgttgaac
agtaccagctcccaagcatcaattcaggggacgagacacaggaagtggaccactcctgaa
acaaaagggaacgaattcatcatggctgaaattagctcaatcacctccgattattccaca
acgtcatctatgacctacctaactggaatggagtcgagtctcttaagcccagaggctcgg
tctgttgccgaaagtagaggagacgaagcggatgatgaacagagtgagcttgttagtgaa
ggtcggccaatggaaaccgatagcgagagtgaattctcagtgtttgctgccagtttggct
cctggaagggttctttgtgatgcattccatgacaaggagcagcaaagtcgcagagggtca
gcagggagtgagttgacggggacagaaggtagcaccacgccaaagctggaaagtcacaga
gcgttcaagtcacacaagctcatcgagtgtgatacgctgtccaggaagaagtgcgtgagg
cagaaaacagacagcgagtcatcggcagagatccgcagtgacaaggaggcaaacaaactg
tcaaagataatggaggtcatgaagaaagggacgtcaaccgggagcctgccttcaacctcg
aagagtgaggtggaaaaaacggaagccgcatggcatctaaaaatctcggaaaggctcaag
tttcgtttgaaggcgtcggcagacgatatgtttggggtcggcatgcagaaaaatagttcg
gccgaggtgcggaaaaagaagagtatcaggcgacgacacaccatggggggacaaagagac
tttgcagagctagccgtcttgaacaactggagcgaacaggaggccgccaacggggacaag
gagttggaactctcggccgtggaccgtctgaagcccaagtgccactctcaggatctttcc
atccgagagtggattgcgcgagagcgtttccgcacaagtaacccagaagcgaatgacgac
tccacagcggaccagttggccgtagaccagggagaaggaccgaagccagggctgccttta
tctgttcgggaaggtactggcagctctagcagcttgactcctgggactcggccttcccca
ttggcgtctccgagtccaatgtcagctgaccaattaaatggtgacaacgtgcagaataag
aacaaaactaatttaagccttgtggtggatgcccaccctcaaaaactctcgggcacccag
gtggttaggtcacgtttttatcagtatctgtaa
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integrated database retrieval system
