Polypterus senegalus (gray bichir): 120540493
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Entry
120540493 CDS
T08668
Name
(RefSeq) probable E3 ubiquitin-protein ligase HECTD4
KO
K17849
E3 ubiquitin-protein ligase HECTD4 [EC:
2.3.2.26
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120540493
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120540493
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
HECT type E3
120540493
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
120540493
NCBI-ProteinID:
XP_039627266
LinkDB
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Position
12:71514298..71618782
Genome browser
AA seq
2348 aa
AA seq
DB search
MREPPAGATEMGSAAVDSSQWLSVKEETIFLHDGLIRVTDLAELPSEIGASEPGDAEQEI
LTFETKNPTELAERLRAICGNQSNAYARLLEYRLNALRGLWNAQRQLALEEQQERENSGD
EETLALLKRQGLLQQPEQAPFTSRMGLLLIFPLIQSQSRTDPSLCNITAEVLLSCLRDCQ
PLSLTKEPTDCLNGLESLLCSWLEDPNRSGLQIPLKHKENSAAALVALACARGSLKTLIH
TVHLLQKQTDLGYLPVADVLYRLLLLEGGPGSPSCLLGGKHVVSWGFEDMLSTPDNSSSG
SESKDADLGRCLATDGLYLYTTNSYGKGISKLGSGLQGTLRGFVYCRNEELEAGWIAFSN
CRLLHRPASFDNKPHYLFQIIDQFTLQVCQIVPMPANHFPVGSTMTTIHLCSDGTYVYWI
WSPAGLNEKTPKGHSVFMDIFELLAQNGVTAANPLHERIILMKKEGESSKCLNELLLSRM
SRFRASHSATLAALTGSTITNTLKEDQSAVNTSCGLPLKTLRRTPMYTCGTYLVMLVSPP
GGSGSSGTRSLFGGTSGLSSLKILASSLVFNISDGQFASRADLIDAPGSSLGRGALVTGL
GACYDAMNNLIWTCSNDYMDQWCNPGNQAFHHVCKRLGVSHVITEPKEEMVPTSEVINQL
LHHVGAMCIHQLNILAASSNLPISTFLGKQHPIESQHFSSICDIMEKAMVNGDTCIIRCI
LVVFQVVFKFFFNPQTERNREIVRRAGLLLWQLLMAPLDQIGDEIQKEVCLAISAGLNSL
YPGEAELNNLLKLVLTEGERNSGLSRLRDVILTNLADQLQNNRFGSEDDEHYRLNDELLH
YILKTVVRESCILITKCQTVAKDDFQKLLSTVPVASPSLQYLMAVQNHLLSNTVLIKPDE
HDDSDSSLQGETLKVQVSGSSFLSAAQTRWRRGNTRRQALVHMRELLTAAVRVGGVTHLV
GPVTMVLQGGPRIEELTCGGMVEQVQEAFGETMTSVVSLCSRYPIACANSIGLLCTIPYT
RSEEKCLVRSGLVQLMDRLCSLSGQRECGSNEKQTKKQRVATMAWAAFQVLANRCVEWEK
VEGCSTDAVHSGLARQVSSLLTNHLARATDCCGNQAAGNDALQDVLSLLNDLSRSQIGKA
ILSQPACVSKLLSLLLDQRPSPKLVLIILQLCRAALPLMSVEDCGNVELPPWSYSIQTLD
SDHDDPGDPASKIASLLLAKLADYVVPGCQTVLSPSASEPDTSLTRASPKNSLKMDKDLG
EEGEAVDGKLSIFIHKREDQSSHEVLQPLLSSSEGRPFRLGTGANMEKVVKMDRDMTKTG
CCEVITEEAASALRKATKWAQSGLIVSVGPPVEIVSQEAASGLSVGDKKKTAQTAICRER
NTELARSDPVRPFISGHVANSMAAEVIALLHSLLTAPESNTALIWTSTAEKVLSRALMFI
PQLGKYAESILENGSSSGRKLAKLQAIARQAVAALCALGGFKETIKIGSEVQVLGKGVLG
SVGVVMSINEQEGIAIVKFPCSDYRKTCKASDVLTVPVSRLCTPRSEALPLYKLSITEKV
VQAVQSMLLPQEGSLSIHTSLPATGDGSSPVMAVVRLLAEIRTRACLVMAQLLEDSSFCE
EFIQQCPAAVEVLNLVAQECSPGERLAVVEAQCERLRMLYRDCARPPPPPLQTDRRQPKE
ITWCPSRVFPPVRACMFSSHLTSVTFLADPSAGGGLPRGTFIYATSPVPVQAPSFYWEIE
IVSYGDTDDDSGPIVSFGFATEAEKRDGAWTNPVGTCLFHNNGRAVHYNGSSLLQWKSVR
LDVALVPGDVAGIGWERAEGTPPPPGQPSKGRVYFTYCGQRLTPFLEDVSGGMWPLVHIQ
KKNTKVRANFGCRPFAYAEGQAHRNAADLCIDLSEEISANFEALPFAMASDSDNDAGASV
ASDPGSHGPPCRIAAVATIQQQYDSDSSCHYKVELSYENLIMSGPNLHPPPIADDESDDD
DDDDIPREDHYALLVKAWETKVFPTIRRRFRNEAERKSGLDQIKGALQLGMVDIARQTVE
FLYEENGGIPRDLYLPTIEDIKDEANKFTIDKVRKGLTVVVRSPESNNTSSNTGGTSLPK
FATRGMMKTFSLHGIVLDVDSMNELVQVETYLRSEGVLVRYWYPIDMLERPQAGSRRTAA
NGLVTLDSTNIQIHRELLRCEASLARLYCRMALLNIFAPKSPHTFTRLFHIPAIRDITLE
HLQLLSNQLLAPSLADGTISSSSILLAQSIQHCIQGQNCSPTDLFYQGNAQPIREWLTVA
ITRALHQGEESLLDLTKQICSFLQNAPEQFPSEEFPVTESKINMDVSFPGAAFVIVSCKE
SQSGFRKE
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagccgcccgcgggggccacagaaatgggctcggcggcggtggactcgtcccag
tggctttccgtcaaggaggagaccattttcctgcacgatgggctcatacgagtcacggac
ttggccgagctgcccagcgagatcggggcgtcggagccgggggacgccgagcaggagatc
ctgaccttcgagacaaagaacccgaccgaacttgcggagcggcttcgggcgatctgcggc
aaccagagcaacgcctacgcccgtctgctggagtatcgcctcaatgccttgcgcggcctg
tggaacgcgcagcgccagctcgccttggaggagcagcaggaacgggagaactcgggcgac
gaggagactctggccctgctgaagcgacagggcctcttgcagcagcctgagcaggcgccc
tttacctcgcgcatggggcttctcctcatcttccccctcattcagtcgcaatccaggacg
gacccctctctgtgtaacatcaccgcagaggtgttgctgagctgcctccgtgactgtcag
ccgctaagccttactaaagagccaacggactgcctcaatggccttgagagcctgctttgc
tcatggctggaggaccccaataggtctggactgcagattcctctgaagcataaagaaaat
tcggcggcagccctggtggcactggcctgtgcaagaggatcactgaagacattaatccac
accgttcatctccttcagaagcagacggacctggggtatttacctgtcgccgatgtgctt
tacaggctgctgctgttggaaggagggcccggctcaccatcatgcctgcttggtggaaaa
catgtggtgtcttgggggtttgaggatatgctgtctacacccgacaacagcagctctggg
agtgaaagcaaagatgccgatttaggccgttgtctggccacagatggcctttatctgtac
actaccaactcctatggcaaaggaatcagtaaacttggctcagggctccaaggcacttta
cgtggctttgtctactgccgcaacgaagagctcgaagctggatggatcgctttcagcaac
tgcaggctcctacaccgacccgcgtcttttgataacaaacctcattaccttttccagatc
atcgaccagttcaccctccaggtgtgccaaattgtgcccatgccagcaaaccacttccct
gttggcagcaccatgaccacaatacatctctgctcagacgggacctacgtctactggatc
tggtctcccgcaggcctgaatgaaaaaactcccaaaggacattctgtgttcatggacatc
tttgaattattggcacagaatggggtcaccgcagccaacccgctccacgagcgaataatc
ctgatgaaaaaggaaggagagtcatccaagtgtcttaacgagctgctcctgagtcgcatg
tcccgcttccgagcctcccattcagctaccctggctgctctcaccggctccaccatcacc
aacactctgaaagaagatcagtctgctgtcaacaccagttgtggcctacctctaaaaacg
ctgcggcggacaccaatgtacacttgtggaacgtatttggttatgctggtctctcctcca
gggggttctgggagcagtggcacacgctcgctgtttgggggtacaagtggtctgtcctct
ctaaaaattttagcatcatctcttgtgttcaacatttccgatggccagtttgcaagccgt
gccgacctcattgatgcgcctggaagttcgctagggcgtggagctctagtcacaggactc
ggtgcctgttacgatgcaatgaacaatctgatctggacctgttcaaatgactacatggac
cagtggtgtaatccagggaaccaggcctttcaccatgtgtgtaagagactcggagtgagc
cacgtcatcacggagcctaaagaggaaatggtgccgaccagcgaggtgattaaccagctc
ttgcaccatgtcggcgccatgtgtatccatcagctgaatattctcgctgccagcagcaat
ctgcccatcagcacctttctgggaaagcagcatccaatcgagagccagcacttcagcagc
atctgtgacatcatggagaaggccatggtcaatggggacacgtgcatcatccgctgcatt
cttgttgtcttccaggtggttttcaagttcttttttaaccctcaaactgagagaaatcga
gagatcgtccgccgtgctggcctgttgctctggcagttgttgatggcaccacttgaccag
atcggtgatgagattcagaaggaagtttgcctagcgatcagtgccggcttaaattccttg
tatcctggtgaggcggaacttaacaacttactcaaactggtgctgactgaaggtgagaga
aacagcggcctgtccaggctccgagatgtcattctaactaaccttgctgaccagctacag
aacaacaggtttgggagtgaagacgatgaacactacaggctgaatgatgagctgctgcac
tacattttgaagacggtggtgcgcgagtcctgcatcctgatcaccaagtgccaaactgtc
gctaaggatgactttcagaaactcctgtctacagtgccagtcgcctcacccagtctgcag
taccttatggcagtacagaaccatttgctgagcaacacagttttaataaaacctgatgag
cacgatgatagtgacagctcccttcaaggggagacattgaaggtacaggtgtctggaagc
agttttctgtccgcggcacagacgcgatggagacgtgggaacacccggagacaagccctg
gtgcacatgagggagctgctgaccgctgccgtgcgagtcgggggtgtcactcatcttgtg
gggcctgtcaccatggtgctgcaaggaggccccagaatagaagaattaacctgtggaggg
atggtggaacaagtccaggaggccttcggagaaacgatgacttcggtggtgtccctgtgc
tcccgctaccccatcgcctgtgcgaacagcattggcctgctctgcaccattccatacacg
aggagtgaagagaaatgccttgtgcgaagtggtttggttcagctcatggaccgcctgtgc
agtctcagcgggcagagagagtgtggctcaaacgagaagcagacaaaaaaacagagagtc
gccaccatggcttgggctgccttccaggtgttggccaatcgctgtgtggaatgggagaaa
gtggaagggtgctccacggacgcagtgcattctgggttggcccgtcaggtgtctagttta
cttaccaatcacttagcccgggctacggactgctgtggcaatcaggcagctggaaacgac
gcccttcaagacgttctaagccttctcaatgacctgtccaggagtcagattggaaaggcg
attctgagccagccagcttgcgtttcaaagcttttgtccctgctcttggaccagcggcct
tcccccaaactcgtcctcattattctccagttgtgccgagctgctttgcccctcatgagc
gtggaggactgtggtaatgtggagctcccaccttggagttactccattcagactctggat
agtgatcacgacgaccccggagatcctgcttcaaagattgcctcattgttgctggccaaa
ctagcggactatgttgtgccaggctgtcaaacagttctgtcacccagtgcctcagagccg
gacaccagtttaactcgagccagtcccaaaaactccttaaaaatggataaagaccttggt
gaagaaggggaggcggtggatggcaaactgtccatcttcattcacaaaagagaagaccag
tcctcgcatgaagtgctgcagccccttttgagcagttcagaaggtcggccattccgcttg
ggtacgggagcaaatatggagaaggtggtgaagatggacagagatatgaccaagactggc
tgctgtgaggtgatcaccgaagaagccgcatctgctctccgcaaagccaccaaatgggcc
cagtctggactgattgtgagcgtgggaccccccgttgagattgtgagccaggaagcggcc
agcgggttgtcagtgggtgataaaaagaaaacggcgcagactgccatctgcagggagagg
aacacagaactggccagatcagatcctgtcaggcctttcatcagcggccatgtggctaac
agtatggctgcagaggtgattgctttgctgcacagtcttctgacggcacccgagtccaac
acggcgctcatctggaccagcacggctgaaaaggtcctgtctcgagctctgatgttcatc
ccccaacttggaaaatacgcggaaagcatcttggagaatggcagcagcagcggcaggaag
ttggcaaagttgcaggccattgcccggcaggctgtagcagctctctgcgcactcggggga
ttcaaggagaccattaagattggctcggaggttcaggtgctgggtaaaggagtcctgggc
agtgtgggagtggtgatgtcgatcaatgagcaagaaggcatcgccatcgttaagtttccc
tgctcggactacaggaagacatgcaaagcttcggatgtcttgacggtgccagtgtcccgg
ctctgcaccccgcggtccgaggccctcccgctctacaagctgtcaataacggagaaggtg
gtgcaggccgtccagtccatgctgctacctcaggagggcagcctctcgattcatacttca
ttgccagccactggagacggctctagccccgtcatggccgtagtgcgcctcctggcagag
atcagaacaagggcgtgtctggtgatggctcagctcctggaggacagctcattctgcgaa
gagttcatccagcagtgcccagcagccgtcgaagtccttaacctggtggcccaggagtgc
agtcccggcgaacgcctggctgtcgtggaagcgcagtgcgagagattaaggatgctgtat
cgggactgcgctcggcctcctccgcctcctctccagacagatcgccgacaacccaaagag
atcacgtggtgtccttctcgggttttccctcccgtccgtgcctgtatgttctcctcgcat
ctgacatcggtgaccttcctggctgacccgagtgctggcggaggtctgccacgtgggacc
tttatctatgctacatctcccgtccctgtgcaggccccttctttctactgggagattgaa
atcgtttcctatggagacacagatgatgacagcgggccaattgtgtccttcggatttgcg
acagaagctgagaaaagagacggtgcgtggactaaccctgtcggcacctgtctctttcac
aataacggacgagctgtgcactacaatggctccagtttgctgcagtggaagagcgtgcgc
cttgatgtggctctcgttccaggagacgttgcaggtattggctgggagcgtgcagaaggg
actccaccaccacctggccagccgtccaaaggcagagtttacttcacctactgtggtcag
cggctcacacctttcctggaggacgtgtctgggggaatgtggcctttggttcacatacag
aaaaaaaacaccaaagttcgagccaattttggatgtcgcccttttgcttacgctgaaggt
caggctcacagaaatgcggccgatttgtgcatcgacctctcggaagagatcagtgctaac
tttgaggcgctcccctttgcaatggcttccgacagcgacaatgacgccggagctagtgtt
gcctcggaccccggatctcatggacctccttgcaggatagcagctgttgccacaatccag
caacagtatgacagtgactcctcctgccactacaaagttgagctgagctacgagaaccta
atcatgtctgggccgaatctgcatccacctccaatcgcagatgatgagagtgatgatgac
gacgacgatgatattccaagggaggaccactacgctttgctggtcaaggcatgggagaca
aaggtctttccaacaattcgaaggagatttcgaaacgaagctgaaaggaaatcaggcctc
gatcaaatcaagggggccctgcaactgggtatggtggatatcgctaggcaaacagttgag
tttctgtacgaagaaaatggtggcatccctcgagacctttaccttcccaccatcgaggac
ataaaagatgaagcaaacaagttcactattgataaagttcgcaaagggttgacggtggta
gtcagatctccagaaagtaacaataccagcagcaacaccggggggacatcgttgccaaaa
tttgctacaagaggaatgatgaaaaccttcagcctccatgggatagttctggatgttgat
tcgatgaatgaactcgtccaggtggagacttacctgcgtagcgagggggtgcttgtacgt
tactggtatccaatcgacatgctggaaaggccgcaagctggatcccgacgcactgcagcc
aatggcctggtgactctggacagcaccaacatccaaatacacagagaactgctgcgctgt
gaggcgtctctcgccaggctgtactgtcgcatggccctcctcaatatttttgctccaaaa
tcgccacacaccttcactcgacttttccatatccctgccatacgggacatcacgttggag
catctgcagcttctgtccaatcagctcttagctccttcactagcagatggtaccataagc
tccagctccattttacttgcccaatccatccagcactgtattcagggccaaaactgctcc
cctacagatctgttctaccagggaaacgctcagccaataagagagtggctgacagtcgcc
ataacccgcgctttgcaccaaggagaagagagcctactggacctgacgaaacagatctgc
tcctttcttcagaatgccccagagcagtttccttctgaagaattcccagtcaccgagtcc
aagatcaacatggacgtcagctttcctggggcagcgtttgtgattgtgtcgtgcaaggag
agtcagtcgggcttccggaaagagtga
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integrated database retrieval system
