Pseudovibrio sp. FO-BEG1: PSE_0691
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Entry
PSE_0691 CDS
T01669
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf02020
Two-component system
psf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSE_0691
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSE_0691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psf03021
]
PSE_0691
Transcription machinery [BR:
psf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSE_0691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_3
Arg_repressor
SWIB
Motif
Other DBs
NCBI-ProteinID:
AEV35203
UniProt:
G8PNT5
LinkDB
All DBs
Position
complement(715141..716679)
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AA seq
512 aa
AA seq
DB search
MAIGPKLEFRQSQQLVMTPQLMQAIKLLQLSNVDLIAHINSELESNPFLERDDSPDGAGP
TAEASTPDNSSDNESGSAEMQEGDWLNNELETTPEAISSNLDSELSNVFPDDNGESQSVD
PVQQKADNWQAPSHNASSGASDYNLEAFVAAEVSLSEHLQEQLGFAISSPTDILIAQQLI
DCLDESGYLRIDAEEMSARLGVTEQDLERVILALQGLDPVGVFARDLSECLKLQLKEKDR
YDPAMQALVENIELLALHDLTKLKRLCRVDDEDLKDMILEIKELNPKPGAAFNTEVAQPI
VPDAFVRPASDGGWTVELNTESLPKVLVNQSYYSEISQSSKKDKELAYFTDSLQTANWLV
KSLDQRARTILKVSSEIVRQQDGFLTYGVQHLRPMNLRVVADAIGMHESTVSRVTSNKYI
ATPRGIFELKYFFSAAIASSEGGESHSAESVRYRIKQLIDAEDPKKILSDDALVKILKDD
GVDIARRTVAKYREALRIPSSVQRRREKKSLT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcggtccaaaattagaattcagacaaagccaacagcttgtcatgacgccgcaa
ctgatgcaggcgatcaagctgttgcagctgtcgaatgtggacctcattgcacatatcaat
agtgagttggaaagtaacccgtttttggaacgggatgacagcccggatggagctggccca
accgctgaagcctccactcctgacaactcctctgataacgagagtggttctgctgagatg
caggaaggtgattggctcaacaatgagcttgagacaacacctgaagccatttcaagcaat
ctggactctgagctctccaatgtctttcctgatgacaatggcgagagccagtccgttgac
cctgttcagcagaaggccgacaactggcaagcgcctagccacaatgcgtcttcaggcgct
tctgactacaatctggaagcctttgttgcagcagaagtttcactcagcgagcatctgcaa
gagcaactgggttttgctatttccagccctactgacattttgatcgcgcaacagcttatc
gattgcctcgatgagagcggatatctgcgcattgatgcagaagaaatgtctgcgcgcctg
ggtgtgactgagcaagatctggaacgggttattctcgcattgcaaggtcttgatcctgtt
ggggtatttgcacgcgacctttctgagtgtctgaaactgcagctcaaagaaaaagaccgg
tatgatcctgccatgcaggctctggtcgagaacatcgagttgctggcactacatgatctg
acaaagctgaagcggctttgtagggtagatgatgaggatctcaaggacatgatccttgag
attaaagagctcaatcccaaacccggtgcagcgttcaacactgaagttgcacagccaatt
gttcctgatgcgtttgttcgcccagcttctgatggcggctggactgttgaacttaacacc
gagagcttgccgaaggttctggtaaaccagagctattactccgagatctcccagagctcc
aagaaggataaggagctggcatacttcacggatagcctgcagaccgcgaactggcttgtg
aagagcctggatcagcgcgcacggacaatcctgaaggtctcttctgaaattgtgcggcag
caggatggttttctcacttatggtgtacaacatctgcgtccgatgaatctgcgtgtggtc
gcagacgccattggtatgcatgaatccactgtgagccgtgtgacctccaataaatacatc
gccacaccgcgcggaatttttgagcttaagtacttcttttctgccgcaattgcgtcttct
gaaggtggtgaatcgcactcagcggaatcagtacgctaccggataaagcagctgattgat
gccgaagatcctaagaagattctctcagatgacgctcttgtgaaaattctgaaagatgac
ggtgtggatatagcgcgacgaactgtagctaagtatcgggaagcattaaggattcccagc
tccgtgcagcgacgcagagaaaagaaaagcctcacctaa
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