Pseudocitrobacter corydidari: G163CM_06080
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Entry
G163CM_06080 CDS
T07750
Symbol
dacD
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
psgc
Pseudocitrobacter corydidari
Pathway
psgc00550
Peptidoglycan biosynthesis
psgc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G163CM_06080 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psgc01002
]
G163CM_06080 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psgc01011
]
G163CM_06080 (dacD)
Enzymes [BR:
psgc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
G163CM_06080 (dacD)
Peptidases and inhibitors [BR:
psgc01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
G163CM_06080 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psgc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
G163CM_06080 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
UGS39923
LinkDB
All DBs
Position
694151..695317
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AA seq
388 aa
AA seq
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MKARLFIAVSLLASSISCAFATDSAVPPVTPPAIKAGSWVLMDYTTGQILTAGNEHQQRN
PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKGNPVFDGSSLMFLKEGDRVSVHD
LSRGLIVDSGNDACVALADYIAGGQPQFVAMMNHYVETLKLRDTHFETVHGLDAPGQHSS
AYDLAVLSRAIIHGEPDFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG
FNLIASAVDGKRRLIAVVMGADSPKGREEQARTLLHWGQQNFDTVQVLQNGKKVGTERIW
YGDKETIDLGTDQDFWLALPKKEIPNIKAKYVLDGKELEAPIAAHQRVGEIQLYDRDKIV
AHWPLVTLESVNKGGMFSRLSDYFHHKA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcccgtttgtttattgctgtatctttgctcgcttcgagtatttcttgcgccttt
gctactgacagcgccgttcctcccgtcacgccaccggcgattaaagccggttcctgggta
ttaatggattataccaccgggcaaattctgaccgctggcaatgagcaccagcagcgcaat
ccggcgagcctgaccaagctgatgactggttatgtggttgatcgcgctatcgacagccac
cgcattacgccggatgacatcgtcaccgtgggccgcgatgcgtgggcgaaaggcaatccg
gtatttgatggctcgtcgctgatgttcctgaaagagggcgatcgcgtcagcgtgcacgat
ctgagtcgtggcctgattgtcgattccgggaacgacgcctgcgtcgcgctggctgattac
attgccggaggccagccgcagttcgtcgccatgatgaatcactatgtggaaacgctgaag
ctgcgtgatacccattttgaaacggttcatggcctggatgcgccggggcagcacagttct
gcttacgatctcgccgtattgtcacgtgcaatcattcacggtgagcctgatttttatcac
atgtacagcgagaaaagcctgacgtggaacggtatcacgcagcagaatcgtaacggcctg
ctatgggataaaaccatgaacgttgatggcctgaaaaccgggcatacctccggcgcgggc
tttaacctgatcgcctcggcggtagacggcaaacgccgcctgattgcggtggtgatgggc
gcagacagcccaaaagggcgtgaagagcaggcgcgcacgttgctgcactgggggcaacag
aatttcgacaccgtgcaggtgctgcaaaacggcaagaaagtcggtaccgagcgcatctgg
tacggcgataaagagaccattgatcttggcaccgatcaggatttctggctggcgctgccg
aagaaggaaattcccaatattaaggcgaaatacgtgctggacggtaaagagctggaagcg
cccatcgccgcgcatcagcgcgtgggggaaatccagctttacgaccgcgataagatcgtc
gcccactggccgctggtcacgctggaaagcgtcaataagggcgggatgttctcgcgcctg
agcgactatttccaccacaaagcgtaa
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