Pseudomonas shahriarae: HU773_008355
Help
Entry
HU773_008355 CDS
T07642
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02020
Two-component system
pshh02025
Biofilm formation - Pseudomonas aeruginosa
pshh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU773_008355
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU773_008355
09142 Cell motility
02040 Flagellar assembly
HU773_008355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshh03000
]
HU773_008355
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pshh02035
]
HU773_008355
Transcription factors [BR:
pshh03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU773_008355
Bacterial motility proteins [BR:
pshh02035
]
Flagellar system
Flagellar assembly proteins
Others
HU773_008355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
bpMoxR
AAA_22
GAAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QXH90870
LinkDB
All DBs
Position
1863563..1865038
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVSSLSSSREVICVLIGTV
NAPGAVLGLLKTLSTWDEFLPVLLMGDISSVDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHTPN
FGATAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgatcgatgacgatagcgttcgccgccgcgacctg
gcggtgattttgaattttcttggcgaagaaaatttgccctgcggcagccatgattggcag
caggctgtcagctctttgtcgtcgagccgtgaagtcatctgtgtgctgatcgggacggta
aacgctcctggcgcagttctgggcctgttaaagacactctcaacctgggatgagttcctt
ccggtgttgctgatgggtgatatttcttccgtggatttgccggaagaccagcgccgccgt
gtactttccaccctggaaatgccccccagctacagcaaattgctcgactccctgcaccgt
gcccaggtctatcgcgagatgtacgaccaggcccgcgagcgcggacgtcaccgcgaaccc
aacctgttccgcagcctggtcggcaccagccgtgcgattcagcacgtgcgccagatgatg
cagcaagtggccgataccgacgccagcgtgctgatcctcggcgagtcaggcaccggcaag
gaagtggtcgcacgtaacctgcattaccactccaagcgccgcgacggaccttttgtgccg
gtcaactgcggggcgatcccggcagaactgctcgaaagcgaactgttcggccacgagaag
ggcgcctttaccggggcgatcaccagccgtgccgggcgttttgagctggccaacggtggc
accctgttcctcgacgaaatcggcgatatgccattgccgatgcaggtcaagctgctgcgc
gtgttgcaggagcgcaccttcgagcgcgtgggcagcaacaagacccagagcgtcgatgtg
cggatcattgccgcgacgcacaagaacctcgaaagcatgatcgaggtcggcagcttccgc
gaagacctgtactaccgcctcaacgtattccccatcgagatggccccgctgcgcgagcgt
gtggaagacatcccgttgctgatgaacgaactgatctcgcgcatggaacacgaaaagcgc
ggctcgatccgtttcaactccgccgcgatcatgtccctgtgccgccacggctggccgggc
aacgtgcgcgagctggccaacctggtggagcgcatggcaatcatgcatccatacggggtg
atcggcgtggtcgagctgcccaagaagttccgctatgtcgatgacgaagacgaacagctg
gtggacagcctgcgcagtgatctcgaggagcgggtggcgatcaatggccataccccgaac
ttcggcgccaccgccatgctgccgcccgaaggcctggacctgaaggactacctcggcagc
ctcgaacaagggctgatccagcaagccttggacgacgccaatggcatcgttgcccgcgcc
gccgagcgcctgcgcatccgccgcaccacgctggtagagaagatgcgcaagtacggcatg
agccgtcgtgaaggtgatgaacaggcggatgattga
DBGET
integrated database retrieval system
