Pseudomonas shahriarae: HU773_015240
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Entry
HU773_015240 CDS
T07642
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU773_015240 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pshh02044
]
HU773_015240 (tssC)
Secretion system [BR:
pshh02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU773_015240 (tssC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QXH87053
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Position
complement(3443636..3445111)
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AA seq
491 aa
AA seq
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MTTSPSAQATPLDSAYSILDDIIAQTRLTADDGTYDIARRGVAAFIEELIKPQNRGEPVK
KQLVDRMIAEIDAKLSRQMDEILHHPDFQALEAAWRGLQLLVDRTDFRENIKIELLNVSR
QDLLDDFEDSPEVVQSGLYKHTYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYVSSV
ACMAHAPFIAAAGPGFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYVALTVP
RFLLRTPYDPVDCPVKTFAYNEHVVSSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGTVEDLPLHHFQSMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSA
SSVQKPKRFGISAEGKAAELNYRLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARVVVSDVDGEPGWYRINLSVRPHFKYMGADF
TLFLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagccctagcgcccaggccacccccctggatagcgcatacagcattctcgac
gacatcatcgcccagacccgcctgacggccgatgatggaacctacgacatcgccaggcgc
ggtgtggcggcctttatcgaggaattgatcaagccacaaaaccgaggcgagccggtcaag
aaacaactggtggaccgcatgattgccgagatcgacgccaagctcagccggcaaatggac
gaaatcctccaccatcccgacttccaggcactggaagcggcctggcggggtttgcagctg
ctggtggatcgcaccgacttccgggaaaacatcaagatcgagctgctcaacgtctcgcgg
caggacctgctggacgatttcgaggactcgccggaggttgtgcagtcgggcctctacaaa
catacctacagcgccgaatacggtcagtttggtggtcagcctgtcggcgccatcatcgcc
aactatttcctgtcgcccagcgcgcctgacgtcaagctgatgcaatacgtatccagcgtc
gcctgcatggctcatgcaccgttcattgccgccgccgggccgggtttcttcggtctggag
agctttaccggcctgccggacctgaaggatctgaaagaccatttcgaagggccgcagttt
gccaaatggcagagcttccgccagagcgaggatgcccgttacgtggccttgacggtgcca
cgctttctcctgcgaacgccctacgacccggtggactgcccggtcaagaccttcgcctat
aacgagcatgtggtcagcagtcatgagcattatctgtggggcaatacggcctacgccttt
gccacgcgcctgactgacagcttcgcccgcttccgttggtgccccaacatcattggcccg
caaagcgggggcacggtggaagatctgccgctgcatcacttccagagcatgggcgaaatc
gaaaccaagatccccaccgaggtgctggtctccgaccgtcgtgagtacgagctggcggag
gagggcttcattgccctgacgatgcgcaagggcagcgacaacgcggcgttcttttccgcc
agttccgtgcagaaacccaagcgcttcggcatcagcgccgagggcaaggccgccgagttg
aactacaggctgggcacccaactgccgtacatgatgatcgtcaaccgcctggcgcactat
ttgaaagtgctgcagcgcgagcagttgggttcatggaaggagcgcaccgacctggagttg
gagctcaacaagtggatccgccagtacgtggccgaccaggagaaccccagcgccgaggtg
cgggggcgacgaccgctgcgggcggcacgggtcgtcgtcagtgacgtcgatggcgagccg
ggctggtatcgcatcaacctcagcgtacgcccgcatttcaaatacatgggggcggatttc
accctgttcctggttggcaagctcgataaagaatga
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