KEGG   Pseudomonas shahriarae: HU773_015255
Entry
HU773_015255      CDS       T07642                                 
Name
(GenBank) Hcp family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pshh  Pseudomonas shahriarae
Pathway
pshh02025  Biofilm formation - Pseudomonas aeruginosa
pshh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pshh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HU773_015255
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    HU773_015255
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pshh02044]
    HU773_015255
Secretion system [BR:pshh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HU773_015255
SSDB
Motif
Pfam: T6SS_HCP CDC37_M
Other DBs
NCBI-ProteinID: QXH87056
LinkDB
Position
3447786..3448301
AA seq 171 aa
MPTPAYLSITGTKQGLITAGTFTQDSVGNIYQEGHEDQILVEAFQHQVIIPRDPQSGQPT
GQRVHKPLMISKVFDKSSPLLFSALTSGEMVKCRLEWYRTSSAGTQEHYFTIELEDAIIV
DIQSRMPNCQDPGNAHFTHLEDVHFTYRKIVWTHEVSGTSGSDDWRSPVAG
NT seq 516 nt   +upstreamnt  +downstreamnt
atgccaacacccgcatacctctcgatcaccggcaccaagcaaggtttgatcacggcaggc
acgttcacccaggattcggtaggcaacatctatcaggaaggccacgaggatcagatcctg
gtcgaggcattccagcatcaggtcatcattccccgcgatccgcaatcgggccagcccacc
ggccagcgtgtccataagccgctgatgatcagcaaggtattcgataaatcttcgccgctg
ctcttcagcgcgctgacgtccggggaaatggtcaagtgccgccttgagtggtatcgcaca
tcatccgccggtacccaggagcactacttcaccatcgagttggaggacgcgatcatcgtc
gacatccagtcacggatgcccaactgccaggatccgggaaatgcgcatttcacccacctg
gaagatgtgcactttacctaccgcaaaatcgtctggacccatgaggtttcgggcacttca
ggctctgacgactggcgcagcccggtggccggctga

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