Plesiomonas shigelloides: SAMEA2665130_2908
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Entry
SAMEA2665130_2908 CDS
T04378
Symbol
rph
Name
(GenBank) Ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pshi03016
]
SAMEA2665130_2908 (rph)
Enzymes [BR:
pshi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
SAMEA2665130_2908 (rph)
Transfer RNA biogenesis [BR:
pshi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SAMEA2665130_2908 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
SBT62331
UniProt:
A0A379CS38
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All DBs
Position
1:complement(3194232..3194948)
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AA seq
238 aa
AA seq
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MRPANRLASQVRPITLTRNFTKHAEGSVLVEFGETKVLCTATVEEGVPRFLKGKGQGWVT
AEYGMLPRSTHTRNQREAAKGKQSGRTMEIQRLIARALRAAVDLTALGEYTITLDCDVIQ
ADGGTRTASISGACVALADALNALVAKGALKANPMKGMVAAVSVGIVDGEALCDLEYVED
SAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEELLSLLALAKAGIADIIAAQKAALSE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccggcaaaccgactggcttcgcaggttcgaccgattaccctgacccgcaatttc
accaaacatgccgaaggttcggtgctggtggagttcggtgaaacgaaagtgctgtgcacc
gcgaccgtggaagaaggcgtccctcgtttcctcaaaggcaaaggacagggctgggtcacc
gccgagtacggcatgctgccacgttcgacccacacccgtaaccagcgtgaagcggccaaa
ggcaagcaaagcggccgtaccatggaaatccagcgtctgattgcgcgcgcattgcgtgcg
gcggtagacctgaccgcgctcggtgaatacaccatcactctggattgcgatgtgatccaa
gctgacggtggcacccgcaccgcctcgatttctggtgcttgtgtggctctggccgatgcg
ttgaacgcgctggtggctaaaggcgcgctgaaagctaatccaatgaaagggatggtggct
gcggtgtcagtgggcatcgtggatggcgaagcactgtgcgatctggagtacgtggaagac
tccgccgccgaaacggatatgaatgtggtgatgatggaagatggccgcatgattgaagtg
caaggcaccgccgagggcgaaccattctcccatgaggagttgctcagcttgctggcgctg
gccaaggccggcattgccgacattatcgccgcgcagaaagcggcgctcagcgaataa
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