KEGG   Pseudooceanicola spongiae: F3W81_20175
Entry
F3W81_20175       CDS       T06866                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pshq  Pseudooceanicola spongiae
Pathway
pshq00300  Lysine biosynthesis
pshq00470  D-Amino acid metabolism
pshq01100  Metabolic pathways
pshq01110  Biosynthesis of secondary metabolites
pshq01120  Microbial metabolism in diverse environments
pshq01230  Biosynthesis of amino acids
Module
pshq_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pshq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    F3W81_20175 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    F3W81_20175 (lysA)
Enzymes [BR:pshq01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     F3W81_20175 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QOL82946
UniProt: A0A7L9WU20
LinkDB
Position
4266329..4267594
AA seq 421 aa
MDHFLYRDGALYAEDVPLAEIAAAVGTPFYCYSTATLTRHFKAFDEALAGMDHMICYAMK
AASNQAILRLMASLGAGMDVVSGGEYARAKAAGVPGDRIVFSGVGKTRDEMRMALSGGVR
QFNLESEPEMEVLNAVALEMGVVAPVTVRVNPDVDAKTHAKIATGKSENKFGIPITRARE
VYARIAEMPGLKAVGIDVHIGSQLTDLEPYRQAFTKVAELTEALRADGHDIIRLDLGGGL
GIPYERNNTAPPLPKEYGAMVQEILGHTGCEIEIEPGRLIAGNAGVMVSEVIYVKQGEGR
DFLIIDGAMNDLIRPAMYDAHHDIVPVVEPAPGAEQQPYDIVGPVCESGDTFAKQRMMVP
LAAGDLVAFRSAGAYGAVMSSEYNTRPLIPEVLVHGDQFAVIRKRPSFEEIINRDTLPEW
M
NT seq 1266 nt   +upstreamnt  +downstreamnt
ttggaccattttctgtaccgcgatggcgcgctttatgccgaagacgtgcccctggccgag
attgccgccgctgtcggcacgccgttctattgctattccaccgcgacgctgacgcgccac
ttcaaggcctttgacgaggcgctggcggggatggatcacatgatctgttacgcgatgaaa
gccgccagcaatcaggcgatcctgaggctgatggccagcctcggggcggggatggacgtg
gtttcggggggcgaatatgcccgcgccaaggccgccggcgtgcccggcgatcgcatcgtc
ttctctggcgtcggcaagacccgggacgagatgcggatggctctgtccggcggcgtgcgc
cagttcaatctggagagcgagccggagatggaggtgctgaacgccgtcgcgcttgagatg
ggcgtcgtggccccggtgaccgtgcgggtgaaccccgacgtcgacgccaagacccacgcc
aagatcgccaccggcaagagcgagaacaagttcggcattccgatcacccgtgcccgtgag
gtctatgcccgcatcgctgagatgcccggtctgaaggccgttggcatcgacgtgcatatc
ggcagccagctgacggatctggagccctaccggcaggcgtttaccaaggtggccgagctg
acggaggctctgcgcgccgatgggcatgacatcatccgcctcgacctcggcggcggcctc
gggattccttacgagcgcaacaataccgcgccgccgctgccgaaggagtacggcgcgatg
gtgcaggagatcctcggccataccggctgcgagatcgagatcgagccgggtcgtctgatc
gcgggcaacgcgggcgtcatggtcagcgaagtgatctacgtcaaacagggcgagggccgc
gatttcctgatcatcgacggcgcgatgaacgatctgatccgccccgcgatgtatgatgcg
caccacgatatcgtgcccgtggtcgagcctgcgcccggtgccgaacagcagccctatgac
atcgttgggccggtctgtgaaagcggcgataccttcgccaagcagcgcatgatggtgcca
ctggcagcgggcgatctggtcgccttccgctcggcgggggcttacggtgcggtgatgtcc
agcgagtacaacacccggccgctgatccctgaggttctggtgcatggcgatcaatttgcc
gtcatcagaaaaagaccgtcctttgaggagatcattaaccgagatacgctacctgaatgg
atgtag

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