KEGG   Pseudomonas siliginis: NF676_05770
Entry
NF676_05770       CDS       T08569                                 
Name
(GenBank) Hcp family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
psii  Pseudomonas siliginis
Pathway
psii02025  Biofilm formation - Pseudomonas aeruginosa
psii03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psii00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NF676_05770
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    NF676_05770
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psii02044]
    NF676_05770
Secretion system [BR:psii02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NF676_05770
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: UST80830
LinkDB
Position
complement(1213640..1214155)
AA seq 171 aa
MATPAYMSVTGEKQGLITAGAFTADSVGNTYQEGHEDQVMVQAFTHDVIIPRDPQSGQPT
GQRVHKPVVITKVYDKASPLLQAALTSGERMSEIVIQWYRTSAQGTQEHYYTTKLEDAII
VAINNKMHNCQDPGNAHFTHLEEVQFTYRKITWTHEVSGTSGSDDWRAPVV
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcaacaccagcgtacatgtcggttaccggcgaaaaacaaggcctgatcactgccggc
gctttcaccgccgactccgttggcaacacctaccaggaaggccacgaagaccaggtcatg
gttcaggctttcacccacgacgtgatcatcccgcgtgacccgcaatccggtcagccaacc
ggtcagcgcgtacacaagccagttgtgatcaccaaggtctacgacaaggcttcgccactg
ctgcaagcagctctgacttccggcgagcgcatgagcgaaatcgttatccagtggtaccgc
acttcggctcaaggcacccaagagcactactacaccaccaaactggaagacgcgatcatc
gtcgccatcaacaacaaaatgcacaactgccaggatccaggcaacgcgcacttcacccac
ctggaagaagtgcagttcacctaccgcaaaatcacctggacccacgaagtatccggtact
tcgggttccgatgactggcgtgctccagtcgtttaa

DBGET integrated database retrieval system