Pseudomonas siliginis: NF676_05900
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Entry
NF676_05900 CDS
T08569
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
psii
Pseudomonas siliginis
Module
psii_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psii03000
]
NF676_05900
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
psii01504
]
NF676_05900
Transcription factors [BR:
psii03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
NF676_05900
Antimicrobial resistance genes [BR:
psii01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NF676_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
LacI
HTH_Tnp_1_2
HTH_22
Motif
Other DBs
NCBI-ProteinID:
UST80854
LinkDB
All DBs
Position
complement(1241017..1241652)
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AA seq
211 aa
AA seq
DB search
MSNNLSAPNGPGRPKDLAKRQAILDAAKTLFLCHGYANTSMDAVASEAGVSKLTVYSHFN
DKETLFSAAVVAKCEEQLPPLFFELPDGIAVENVLLNIARGFHQLINSDESVNLHRLIMA
LGSQDPKLSLIFFEAGPERVVNGMEGLLAKVHATGALSIDQPRNAAEHFFCLIKGAGNFR
LLYGCGEPLTGEAAERHVREVVGLFMRAYKP
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaatctttcagctccaaacggcccgggccgccccaaggatctggccaaacgc
caggcgatcctggatgcggcgaaaaccctgtttctctgccatggctacgccaacaccagc
atggacgcggttgccagcgaggcgggcgtgtcgaagctgacggtctacagccatttcaac
gacaaggagacgctgttctccgctgccgtcgtcgcgaaatgcgaggaacaattgccgccg
ctgttcttcgaattgccggacggcatcgcggtggaaaatgtattgctgaacattgcccgg
ggctttcaccaactgatcaacagcgatgaatcagtgaacctgcaccgcctgatcatggcg
ctgggcagtcaggatccgaagctgtcgctaatcttcttcgaggccggcccagagcgcgtg
gtcaacggcatggaaggtctgctggcgaaagtccatgcaaccggcgcgctgagcatcgac
cagccacgcaacgccgccgagcacttcttctgcctgatcaaaggggcggggaattttcgt
ttgttgtatggctgcggcgagccgctgactggagaagcagcggagcggcatgtgcgggag
gtggtggggttgtttatgagggcttacaaaccctga
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