Pseudomonas siliginis: NF676_06555
Help
Entry
NF676_06555 CDS
T08569
Name
(GenBank) ATP-dependent DNA ligase
Organism
psii
Pseudomonas siliginis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
UST80977
LinkDB
All DBs
Position
complement(1375890..1377578)
Genome browser
AA seq
562 aa
AA seq
DB search
MKAFAELYAELDATTSSNAKLAAMQVYFAQAAPEDAAWAVYFLSGGRPRQLVPVRILREL
AVEVSGLEPWLFEESYQAVGDLAETISLVLPENSHSSEAGLAEWIEDKLLPLRGETPEYL
ARQLPMLWAQLDRPSLMLCIKLITGSFRVGVSKLLVTRALASMAGLDSKRVAQRLVGYTD
LSNRPNAASYLKLIAPESADEHAQRGGQPYPFFLAHALAQPVEEFEALLGPASDWQVEWK
WDGIRAQVVKRDGKLWVWSRGEELVTERFPEFDVLVHGLPDGTVIDGEIVVWKSTHPTTE
DAFDPQSDEPPAVQPFALLQQRIGRKTLDKKILEEVPVVVLAYDLLEWQGEDWRNQPQVK
RRAQLEEVIARCNSPVLLPSPVLTGEDWFDLGLQREASRKLGVEGMMLKARDSLYGVGRT
KDMGVWWKWKVDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDGPPESSQRSLVPFAKAY
SGLTDEEMRQVDSIVRKTTVEKFGPVSSVKPSLVFELGFEGIALSRRHKSGIAVRFPRML
RWRKDKTVEEADSLATLQDLLA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgttcgccgagttatatgccgaactcgacgccaccacgtcgagcaacgccaag
ctggcggcgatgcaggtgtacttcgcgcaggccgcgccggaagatgccgcatgggcggtg
tatttcctctccggtggtcggcctcgtcaactggtgccggtgcgcatcctccgtgagctg
gcggtagaagtttcagggttggagccgtggctgttcgaagaaagctatcaggccgtcggc
gatctggccgagaccatttctctggtgctgccggaaaattcccacagctccgaggccggt
ctagccgaatggatcgaagacaagctgctgccacttcgcggtgaaaccccggaatatctg
gcgcgccaactgccgatgttgtgggcgcaactggatcggccgagcctgatgctgtgcatc
aagctgatcaccggcagtttccgcgtcggcgtgtcgaagttgctggtcacccgcgccctg
gcgtcgatggccggcctcgacagcaaacgcgtcgctcagcgtctggtcggttacaccgat
ctgtcgaaccggcccaacgccgcgagttacctgaaactcatcgccccggaatccgccgac
gaacatgcccagcgcggcggccagccctacccgttctttcttgcccacgccttggcgcaa
ccggtcgaggaattcgaagccctgctcggccccgccagcgactggcaggtggaatggaag
tgggacggtatccgcgcgcaagtagtcaagcgcgacggcaagctgtgggtgtggtcgcgc
ggcgaggaattggtgaccgagcgcttccccgagttcgatgtgctggtccacggcttgccc
gacgggacggtgatcgacggcgaaatcgtcgtgtggaagagcacccatccgactacggaa
gatgccttcgatccgcaatccgatgagccgccggccgtgcaaccgttcgccctgctgcaa
caacgcatcggtcgcaagacgctcgacaagaaaattctcgaagaagtgccggtggtagtg
ctggcctacgacctgctggaatggcagggcgaggactggcgcaaccagccgcaggtcaag
cgacgggcgcaactcgaggaagtcatcgcgcgctgcaacagcccggtactgctgccctcc
ccggtactgaccggcgaggactggttcgaccttggcctccagcgcgaagcgtcacgcaaa
ctcggcgtcgaaggcatgatgctcaaggcccgcgattcgctgtatggcgtcggccggacc
aaggacatgggcgtgtggtggaagtggaaggtcgacccgttcagcgtcgacgcggtactg
atttatgcccagcgcggacacggtcgtcgcgccagtctgtacagcgattacaccttcgcg
gtgtgggacggcccgccggaatccagtcaacgctcgctggtgccgttcgccaaggcgtat
tcggggctgaccgatgaagagatgcgtcaggtcgacagcatcgtgcgcaagaccaccgtg
gagaaattcggcccggtcagcagcgtcaagccgagcctggtgttcgaactcggcttcgaa
ggcatcgccctgtcgcgccggcacaagagcggcatcgccgtgcgtttcccgcgcatgctg
cgctggcgcaaggacaagaccgtcgaagaagcggacagcctcgctacccttcaggatctg
ttggcctaa
DBGET
integrated database retrieval system
