Pseudomonas siliginis: NF676_26960
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Entry
NF676_26960 CDS
T08569
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
psii
Pseudomonas siliginis
Pathway
psii02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NF676_26960 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psii02044
]
NF676_26960 (tssB)
Secretion system [BR:
psii02044
]
Type VI secretion system
Imp/Vas secretion system core components
NF676_26960 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
UST79732
LinkDB
All DBs
Position
complement(5853771..5854274)
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AA seq
167 aa
AA seq
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MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRKDDRKIEDRKPISIDKM
TFDEVLAKQELGLTLSVPNRLQEDGEAEELAVQLRVNSMKDFNPASLVEQVPELKKLMEL
RDALVALKGPLGNAPAFRKAIEGVLADDESRGRVLGELGLNAAAPDA
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaggctcggtagcccccaaggaacgcatcaacgtcaccttcaaacccgcc
accggcggagctcaggaagagattgaactgccgctgaagctgctggcaatcggtgactac
acccaccgcaaggacgatcgcaaaatcgaagatcgcaagccgatcagcatcgacaagatg
accttcgacgaagtgttggccaagcaagagctgggtctgacgctgagcgtgccgaaccgt
ctgcaggaagatggcgaggctgaagagctggccgtgcaattgcgcgtcaattcgatgaag
gacttcaacccggccagcctggtcgagcaagtgcctgagctgaaaaaactgatggaactg
cgcgatgcgctggtggccctcaaaggcccgctgggtaacgcacctgcgttccgtaaagcg
atcgaaggcgtgctcgccgacgacgaatcccgcggtcgcgtactcggtgagctgggcctg
aacgccgcagccccggacgcctga
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