Phocoena sinus (vaquita): 116757611
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Entry
116757611 CDS
T07759
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116757611 (DENND4B)
Membrane trafficking [BR:
psiu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116757611 (DENND4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
SPA
PPR_3
Motif
Other DBs
NCBI-GeneID:
116757611
NCBI-ProteinID:
XP_032495441
Ensembl:
ENSPSNG00000001848
LinkDB
All DBs
Position
1:complement(112787798..112803045)
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AA seq
1505 aa
AA seq
DB search
MKADAVSEGGAMAEERPPRLVDYFVIAGLAGNGAPIPEETWVPEPSGPLRPPRPAEPITD
VAVIARALGEEVPQGYTCIQASTGGHPLELSAGLLGGTQPVICYRRGRDRPPLVELGVLY
EGKERPKPGFQVLATTPYSHSANLAPPGPGHPRTYLTYRRAAEGAGLHALGITDLCLVLP
SKGEGTPHTYCRLPRNLNPGMWGPAVYLCYKVGLAKANTLVYEAELLGRYPEEDNEAFPL
PESVPVFCLPMGATIECWPAQTKYPVPVFSTFVLTGAAGDKVYGAALQFYEAFPRTRLSE
RQARALGLLSAVERGRALGGRAVRSRRAIAVLSRWPAFPAFRAFLTFLYRYSVSGPHRLP
LEAHISHFIHNVPFPSPQRPRILVQMSPYDNLLLCQPVSSPLPLSGASFLQLLQSLGPEL
AITLLLAVLTEHKLLVHSLRPDLLTSVCEALVSMIFPLHWQCPYIPLCPLVLADVLSAPV
PFIVGIHSSYFDLHDPPVDVICVDLDTNTLFQTEEKKPLSPRILPRRPCKVLLTTLTNLY
QQLDQTYTGPEEEASLEFLLTDYEAVCGRRARLEREVQGAFLRFMACLLKGYRDFLRPLT
QAPSEGSRDVDNLFFLQGFLKSRERSSHKLYSQLLHTQMFSQFIEECSFGSARHAALEFF
DSCVDKVHPEQEKPEPTPLVELEELSGSELTVFITPPEEPPAPEGGESTPQYCYDGFPEL
RAELFESPQEQPGALPVPGPSRSAPSSPAPRRTKQEMKIAQRMAQKSAAVPELWARCLLG
HCYGLWFLCLPAYVRSAPSRVRALQTAYQVLRQMESRKVVLPDEVCYRVLMQLCSHYGQP
VLSVRVMLDMRRAGIVPNTITYGYYNKAVLEGKWPSGTPGGRLRWAKLRNVVLGAAQFRQ
PLRERRQRWQRQKQEEEAETAAQEAGGSQTEPYLERPSPTRPLQRQTTWAGRSLRDPASP
TGRLVKSGSLGSARGAQPTVEAAVAHMIEALGVLEPRGSPVPWHDGSLSDLSLTGEEPAP
GGSPGDAGSALNTQSTETLQGPSGRVPKAGWHQDEASTPRRGLGARLQQLLTPSRRSPAS
RVPPPELPPDLPPPARRSPMDSLLCPRERPGSTASEVSSASLGSEWDLSESSLSSVSLRH
SSERLSDTPGSLQPPSLEILLSSCSLCRACDSLVYDEEIMAGWAPDDSNLNTTCPFCTCP
FVPLLSVQTFDSRPSAPSPKPSSAGASGSKDAPVPGGPGPVLSDRRLCLALDEPQLCNGH
VGGTSRRVESGAWAYLSPLVLRKELESLVENEGSEVLALPELPAAHPIIFWNLLWYFQRL
RLPSILPCLVLASCDGPPPPQAPSPWIMPDPASVQVRLLWDVLTPDPNSCPPLYVLWRVH
SQIPQRVVWPGPVPASLSLALLESVLRHVGLNEVHKAIGLLLETLGPPPTGLHLQRGIYR
EILFLTLAALGKDHVDIVAFDKKYKSAFNKLASSTGKEELRQRRAQMPTPKAIDCRKYFG
APLEC
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagatgcagtgagtgaggggggggccatggcggaggagcggcccccccggctg
gtggattacttcgtgatagctgggcttgcagggaacggagcacccatccctgaggaaacg
tgggttcctgaacccagtgggccccttcgccctccccggccagctgagcccatcacagat
gtggcagtcatcgctagggccctgggcgaggaggtgccccagggctacacatgcatccag
gcttctaccgggggccaccccttggaactcagtgctgggctcctgggtggaactcaacca
gtcatctgctaccggagggggcgtgacaggccccccctcgttgagctgggggtgttgtat
gagggaaaggaacgtcccaagcctggcttccaagtgctagctacgacaccctacagccac
tcagccaacctggcccctccaggccctgggcacccccgcacctacctcacttaccggcgg
gcagcagagggggcagggttgcatgccctgggcatcactgacctctgcctggtgctgccc
agcaagggcgagggcacgcctcatacttactgccgattgccccgcaacctcaaccctggc
atgtggggcccagcagtgtacctgtgctacaaggtgggtctggccaaggccaacacgctg
gtgtatgaggcagagctgctgggccgctacccagaggaggacaatgaggcgttcccgctg
cccgagtcagtgcccgtcttctgcctgcccatgggggccactatcgagtgctggcctgcc
cagaccaagtaccccgtgcccgtcttctccacctttgtgctcacgggtgcagctggtgat
aaggtgtacggtgctgccttgcagttctacgaggcattcccgaggaccaggctctcggag
cggcaagcgcgggccctgggcctgctgagcgccgtggagcggggccgggcactggggggc
cgagctgtgcgcagccgccgtgccatcgctgtgctgtcccgctggcctgccttccctgcc
ttccgcgccttcctcaccttcctctaccgctactccgtctcaggcccccaccgcctgccc
ctggaagcgcacatctcccacttcattcacaatgtccccttcccttccccacagagaccc
cgcatcctggtgcagatgtctccctatgacaacctgctcctctgccagcctgtatcctca
cccctgcccctcagtggtgccagcttcctgcagctgctgcagagcctgggccctgagctg
gctatcacgctgctgctggctgtgctcacggagcacaaactgctagtccactcactgcgg
ccggacctgctcaccagcgtctgcgaggccctcgtctctatgatcttcccgctgcactgg
cagtgcccctacattccgctgtgcccgctagtgctggcagatgtgctgagcgcccccgtg
cccttcattgtgggtatccactccagttacttcgatctgcatgacccgcctgtggatgtc
atctgtgttgatcttgataccaacacactcttccagactgaggaaaagaagcccctctcc
cctcggatcctgccccgcagaccctgcaaggttctgctgactacactgacaaacctatac
cagcagctggatcagacatatactggacccgaggaggaggcctccctggaattcctgctg
acagactatgaggcagtgtgcggccgccgggcccggctggagcgcgaggtccagggagcc
ttcctccgcttcatggcctgcctgctcaagggctaccgggacttcctacgcccgctcacc
caggccccctctgaggggtctcgtgatgtcgacaacctcttcttcctgcagggcttcctc
aagtcccgggagcgctccagccacaagctgtactcccagctgctgcacacacagatgttc
tcgcagttcatcgaggaatgttctttcggctctgctcgtcatgctgccctggaattcttc
gactcttgtgttgacaaggtccacccagagcaggagaagccggagccaacacccttggtg
gagctggaggagctgtcagggagtgagctcactgtctttatcacacctcccgaggagccg
ccggcgccagagggcggtgaatctaccccccagtactgctatgatgggttccccgaacta
cgggctgagctgtttgagtctcctcaagagcaacccggggctctgcctgtgccaggtcca
tcccgtagtgcccccagcagtcctgcccctcgccgtaccaaacaggagatgaagatcgca
cagcggatggcgcagaagtcagcagctgtgcctgagctctgggcccggtgcctgctcggc
cactgctatgggctgtggttcctgtgtctgcctgcctacgtgcggtcggcgccctccagg
gtgcgggcactgcaaacggcttaccaggtgctgcgccagatggagagccgcaaggtggtg
ctgcccgacgaggtgtgttaccgggtgttgatgcagctctgctcacactatgggcagccc
gtgttgtccgtgcgggtcatgctggacatgcggcgggcaggcatcgtgcccaacaccatc
acctacggctactataacaaggccgtgctggaaggcaagtggccgtctggtacaccgggt
gggcgcctgcgctgggccaagctccggaacgtggtcctgggggctgctcagttccgccag
cccttgagagaacggcggcagcggtggcagcgtcagaagcaggaggaggaggcagagaca
gcagcacaagaggcaggcggctcccagacagagccctatctggagcgcccctcccctacc
cgcccccttcagcgccagactacctgggctgggcgaagcctgagggaccctgcctcgcct
acggggcgcctggtgaagagtggcagcctgggtagtgcccgaggggcacagcccactgtg
gaggctgccgtggcccacatgatagaggccttgggggtactggaaccccggggatcacct
gtgccctggcacgatggaagcctctcagacctgagcctgaccggggaggagccggcacct
ggaggcagcccaggggacgcaggctcagccctgaatacccagtccactgaaaccctgcaa
gggccaagtgggcgggtgcccaaggctggctggcatcaggatgaggccagcaccccccga
agagggctgggtgcccgcctccaacagctgctcactccttcccgccgctcccctgcctct
cgtgttcctccgcctgagctgccccctgacctgcctcccccagcccgccgcagccccatg
gacagccttctgtgcccacgggagcgccctggatccactgcatccgaggtaagctcagcc
tctctgggcagtgagtgggacctctcagaatcttctctcagcagcgtgagccttcgccat
tcctcagagcgcctcagtgacacccctggatccttgcagccgccttccctggaaatcctg
ctgtctagctgctccttgtgccgcgcctgtgattccctggtgtatgatgaggagatcatg
gctggctgggcacctgatgactccaacctcaacacaacctgtcccttctgcacctgcccc
tttgtgcccctactcagtgtccagacctttgattcccgaccaagtgcccccagccccaag
ccttcctctgctggtgccagtggcagcaaagatgctcctgtccctgggggcccaggccct
gtgctcagtgaccgcaggctctgccttgccctggatgagccccagctctgcaacggacac
gtggggggtacctcccggcgtgtcgagagtggggcatgggcgtatctgagccccttggtg
ctgcgtaaggaactggagtcgctggtagagaacgagggcagtgaggtgctggcgttgcct
gagctgcctgctgctcaccccatcatcttctggaaccttctgtggtatttccagcggcta
cgcctgcccagtattctgccatgcctggtgctggcctcctgtgatggccccccacctccc
caggccccgtctccttggataatgcctgatccagcatctgtgcaggtgcggctgctgtgg
gatgtcctgacccctgaccccaacagctgcccacctctctatgtgctctggagggtccac
agccagatcccccagcgggtggtatggccaggcccagtacctgcatcccttagtctagca
ttgctggagtccgtgctgcgccatgtcggtctcaatgaggtgcacaaggctatagggctc
ctgctggaaactctagggccccctcccactggcctgcacctacagaggggcatctaccgt
gagatcttattcctgacattggctgctctgggcaaggaccacgtggacatagtggccttc
gacaagaagtacaagtccgcctttaacaagctggccagcagcacgggcaaggaggaactg
aggcagcggcgggcacagatgcccaccccaaaggccattgactgccgaaaatattttgga
gcacctctggaatgctag
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