Phocoena sinus (vaquita): 116761521
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Entry
116761521 CDS
T07759
Symbol
SSR1
Name
(RefSeq) translocon-associated protein subunit alpha isoform X1
KO
K13249
translocon-associated protein subunit alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116761521 (SSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116761521 (SSR1)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
TRAP complex
116761521 (SSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAP_alpha
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
116761521
NCBI-ProteinID:
XP_032503224
Ensembl:
ENSPSNG00000013814
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All DBs
Position
11:99006064..99028121
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AA seq
286 aa
AA seq
DB search
MKPFCRLLLLLLLVLPATLLLRGHPGGSLAAAQDLTEDEETVEDSVIEDEDDEAEVEEDE
PTDLAEDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFVVESL
DASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDL
NGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVVVGLHQLLESRKRKRPIQK
VETGTSSQSDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSDE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccttctgccgcctgctgctgcttctcctgctggtgttacccgccactctcttg
ctccgaggccaccctggaggctcattggcagcggctcaagatcttacagaagatgaagaa
acggtggaagattctgtaattgaagatgaagatgatgaagcagaagtggaagaagatgaa
cccacagatttggctgaagataaagaggaagaagatgtatctggtgaacctgaagcttca
ccaagtgcagatacaaccatcctgtttgtgaaaggagaagattttccagcaaataacatt
gtgaagttcctggtaggctttacaaacaagggtacagaagattttgtcgttgaatctcta
gatgcctcattccgttaccctcaggactaccagttttacatccagaatttcacggctctt
cctctgaacactgtggtgccgccccagagacaggcgacttttgagtactccttcattccc
gcagagcccatgggtggccggccctttggtctagtcatcaatctgaactacaaagatttg
aacggcaatgttttccaagatgctgtcttcaatcaaacagttacagttattgagagagaa
gatgggctagatggagagacaatctttatgtatatgttccttgctggtcttgggcttttg
gtggtggttggccttcatcaactcctagaatctagaaagcgcaagagacccatacagaag
gtagagacgggtacctcgagtcagagtgatgttgacatgagctggattcctcaggaaact
ttgaatcagatcaataaagcttcacccagaaggctgccccggaaacgggcacagaagaga
tcggtgggatctgatgagtaa
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