Phocoena sinus (vaquita): 116761913
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Entry
116761913 CDS
T07759
Symbol
RIOK1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116761913 (RIOK1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psiu01001
]
116761913 (RIOK1)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiu03009
]
116761913 (RIOK1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116761913 (RIOK1)
Protein kinases [BR:
psiu01001
]
Serine/threonine kinases: Other
RIO family [OT]
116761913 (RIOK1)
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
Pre-40S particles
Kinases
116761913 (RIOK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
ABC1
C6_KAZAL
Csm1_B
Motif
Other DBs
NCBI-GeneID:
116761913
NCBI-ProteinID:
XP_032504248
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Position
11:complement(98921022..98951646)
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AA seq
727 aa
AA seq
DB search
MRPSTSSSPGLAYESFQGRTQSGEPTRKAPEGTVSPGSAGNNGNTNGPHTSGPSRVLRDA
SFRRSARRGGGASGGKTNSVRGGASCPGGSVARLGIPSPRTWRALCARGLLSGLLGGRHA
QRPLDRRIKPSLCRSCSGAGRAAAGGAEARRAAVMDYRRLLMSRVVPGQFDDADSSDSEN
IDLKTVKEEGDILFEDLQNNVDEKMGEGEMEREEEEDYDDDDDWDYDDGFGKLVRCSASG
GGSNLQANRQTPSCNSAKMSTPSDKVLRKFENKINLEKLNVTDSVINKVTGKFRQKEADM
YRIKDKSDRATVEQVLDPRTRMILFKMLTRGIISEINGCISTGKEANVYHARTANGESRA
IKIYKTSILVFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAEIPCPE
PILLRSHVLVMSFIGKDDMPAPLLKNVQLSNXQGSELYAQVIEYMRRMYQDAMLVHADLS
EFNMLYQGGGVCIIDVSQSVEHDHSACLEFLRKDCANVNGFFLKHGVAVMTVRELFEFVT
DPSVTHENVDAYLAKAMEIASQRTKEERSSQDHVDEEVFKRAYIPRTLNEVKNYERDVDI
MMKLKEEDMAMNAQQDNILYQTVTGLKKDLSGVQKVPALLENQIKESQVKEKTCSDSEDA
RSSQCSDTDSEDQGDNACSRKPTADLEVDKKERKKMVKEAQREKRKNKVPKHVKKRKEKT
AKTKRSK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgagaccctccacgtccagcagccccgggctagcttatgagtccttccaagggaggaca
cagagcggggagccgactcgaaaagctccggaaggaacagtaagcccaggctcggcgggg
aacaacgggaacacgaacggcccacacacctcgggtccctctcgcgtcctgcgggacgcg
agcttccggcgctcagcccggcgcgggggcggggcttccggtgggaagacgaattccgtt
cggggcggggcttcctgtccgggtggctcggttgctaggcttggaattccatccccccgc
acgtggcgcgcgctttgtgcgcgggggcttctgagcggtttgctaggcggacgtcacgcg
cagaggccgttggatcggcggataaaaccgtccctgtgccgttcctgctccggcgcaggg
cgagcggccgccggtggcgctgaggctcggcgcgctgccgtcatggactaccggcggctg
ctgatgagtcgggtggttccggggcagtttgacgatgccgactcctcggacagtgaaaac
attgacttgaagactgtcaaagaggaaggtgatattctgtttgaagaccttcagaataac
gtggatgagaagatgggtgaaggtgagatggaaagggaggaagaggaggattatgacgac
gatgatgactgggactacgatgatggatttggaaaactggtcaggtgctcagcctcaggt
ggagggagtaacctgcaggcaaatcgacagactcccagttgcaattcagccaaaatgtct
actccatcagacaaggtcttacggaaatttgagaataaaattaatctagaaaaactaaac
gttactgattctgtcataaacaaagtcacgggaaagtttagacaaaaggaagcagatatg
tatcgcatcaaagataagtcggacagagcaactgtagaacaggtgttggatcccagaaca
cgaatgatactgttcaagatgttgacgagaggaatcatatcagagatcaatggctgcatt
agcacaggaaaagaagctaatgtatatcatgctcgcacagcaaacggagagagcagagca
atcaaaatttataaaacttctattttggtgttcaaagaccgggataagtatgtcagtggg
gaattcaggtttcgtcatggctactgtaaaggcaaccccaggaaaatggtgaaaacgtgg
gcggaaaaggaaatgaggaacttaatcaggctaaacacggcagagatcccgtgcccagaa
cctatcctgctgcgaagtcacgttctcgtcatgagtttcatcggcaaagacgacatgcca
gcgccgctcttgaaaaacgtccagttatcgaatnnccaaggctcggagttgtatgcgcag
gtgatcgagtacatgaggagaatgtaccaggacgccatgctcgtgcacgcggatctcagt
gaattcaacatgctgtaccagggcggaggcgtgtgcatcattgacgtttctcagtccgtg
gagcatgaccactccgcatgcctggagttcttgaggaaggactgcgccaacgtcaacggt
ttctttctgaagcacggggtcgccgtgatgactgtgcgagagctctttgaattcgtcacg
gatccgtcagttacacacgagaacgtggacgcatatctggcaaaggctatggaaatagca
tctcaaaggaccaaggaggaaaggtccagccaagatcatgtggatgaagaggtgtttaag
cgagcttatattcctagaaccttgaatgaagtgaagaattatgagagggatgtggatata
atgatgaaattgaaggaagaggacatggccatgaacgcccagcaggacaacattctatac
caaactgtcacgggactgaagaaggatttgtcaggagttcagaaggtccctgcactccta
gaaaatcaaattaaggaaagtcaagttaaggaaaagacttgttctgattcagaagatgcc
agaagctctcagtgttctgacacagactctgaagaccagggagacaacgcctgctccaga
aagcccaccgctgaccttgaagttgataaaaaggaaagaaaaaagatggtcaaggaagcc
cagagagagaaaagaaaaaacaaagttcctaaacatgtgaaaaaaagaaaggagaagaca
gccaagacgaaaaggagcaaatag
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