Pseudomonas sp. TKP: U771_25200
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Entry
U771_25200 CDS
T02969
Name
(GenBank) LysR family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
psk
Pseudomonas sp. TKP
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psk03000
]
U771_25200
03036 Chromosome and associated proteins [BR:
psk03036
]
U771_25200
Transcription factors [BR:
psk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
U771_25200
Chromosome and associated proteins [BR:
psk03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
U771_25200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_AsnC-type
MarR_2
Cro
HTH_34
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AHC37524
LinkDB
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Position
complement(5542516..5543409)
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AA seq
297 aa
AA seq
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MFDYKLLSALAAVVEQAGFERGAQVLGLSQSAISQRIKLLEARVGQPVLVRVTPPTPTDI
GRRLLNHVQQVRLLERDLQSQVPALDEEGMPERLRIALNADSLATWWAEAVSEFCAEQHL
LLDLVVEDQTVGLKRMRAGEVAACICASERPVAGARSLLLGAMRYRALASPAFIARHFPA
GVRADELARTPALVFGPDDFLQHRYLASLGVEGGFEHHLCPSSEGFIRLTEAGLGWGLVP
ELQVRDQLQKGVLLELLPDKPIDVPLYWHHWRSGGQLLGLLTDHLAQACGQWLVPLE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactataaattgctctccgccctggcggcggtggtggaacaggccgggttcgaa
cgcggcgcacaggtgctggggctgtcgcagtcggcaatctctcagcgcatcaaattgctg
gaagcgcgggtcggccagccggtgctggtgcgggttacgccgccgacacccaccgatatc
ggccgacgcctgctcaaccatgtgcagcaggtgcggttgctggagcgtgacctgcaaagc
caggtgccggcactggacgaagagggcatgcccgagcgcctgcgtatcgccctgaatgcc
gacagcctcgccacttggtgggccgaggccgtcagcgagttttgcgccgagcagcatttg
ttgttggacctggtggtggaagaccagaccgttggcctcaaacgcatgcgcgccggcgaa
gtggcggcttgcatttgtgccagcgaacgcccggtggccggtgcacgcagcctgttgctg
ggggccatgcgctatcgggcgttggccagcccggcctttattgcccggcatttcccggca
ggcgtgcgtgccgatgaactggcgcgcacgcccgccttggtgttcggccctgatgatttc
ctgcaacaccgttacctggcctctcttggagtagaaggcggttttgaacatcatttatgc
ccatcatccgaaggcttcattcgcttgactgaagccgggctcggctggggcctggtgccg
gagttgcaggtgcgcgaccagttgcaaaagggcgtgttgcttgagttattgccagataag
cccatcgatgtaccgttgtactggcatcattggcgcagtggcgggcaactgctgggctta
ttgaccgaccatctggctcaggcctgtggtcaatggttggtgccgttggagtga
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