Pseudomonas solani: PSm6_18180
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Entry
PSm6_18180 CDS
T09213
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
psoa
Pseudomonas solani
Pathway
psoa02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSm6_18180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psoa02044
]
PSm6_18180
Secretion system [BR:
psoa02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSm6_18180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
BCD85411
LinkDB
All DBs
Position
complement(1975378..1976733)
Genome browser
AA seq
451 aa
AA seq
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MNIDRPLWAAGTLLSPQQFQQQARWEAWTNERIARLALVHPWGVLAADFDADALRMGRLK
ASRLHVRMPDGTLIDTDRADHLPPALELSRVLADDIRSATLLLALPLEQGNGNNCVLDGQ
REDRPTRYRQNWQAVQDLYGDERQSISVMEHQLSLRLASDDNGDYLTCPVVRLLRDTQGT
WAVDAGYVPPLLSLDAHAGLLVQLDNLFIQLSAKRQRLMAMRRESNQRMADFAVADVSLF
WLLNALNTYQPILADLRAHPARHPEQVYLELAKLAGSLSTFSLEHDIDQVPVYRHEQLER
VLPPLMSMISTLLEASLPSRVIALELEESGANRWKVSLHDPRLREPDGADFYLSVRSRLS
AAQLQSQFPHLCKVGTPDDVDHLVNAALDGIPLQPLNHVPAAIPLRLENQYFALDLGHPK
GRAMLAAGVCAFYVPATLIDARLELFAVLRS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgaccgccccctctgggctgcggggacgcttctgtccccgcagcagttccag
caacaggcccgctgggaagcctggaccaacgagcgcatcgcccggctcgccctcgttcat
ccctggggcgtactggcagccgacttcgatgccgatgccctgaggatgggccggctcaag
gcatcgcggcttcacgtgcgcatgccggacggcacgctgatcgataccgaccgcgccgat
cacctgccgccggcgcttgagctgtcccgcgtcctggccgacgacatccgcagcgccacc
ctgctgctggcattgccgctggaacagggcaatggcaacaactgtgtgctcgatggccag
cgtgaagaccggcccacccgctaccgccagaactggcaggcggtgcaggacctctatggc
gatgagcgccagtccatcagcgtcatggagcaccagctcagcctgcgcctggccagcgac
gacaacggcgactacctgacctgcccggtggtgcgcctgctgcgcgatacccagggaacc
tgggccgtggatgccggctacgtaccgccattgctgagcctcgatgcccatgcgggcctg
ctggtgcagctggacaacctgttcatccagctgtccgccaagcgccagcgcctgatggcc
atgcgccgtgaaagcaaccagcgcatggccgatttcgcggtggcggacgtctcgctgttc
tggctgctcaatgcgctcaacacctaccagccgatcctcgccgacctcagggctcatcct
gcgcgtcatcccgagcaggtctacctggagctggcgaagctcgccggcagcctgtcgacc
ttttcgctggagcacgacatcgaccaggtgccggtctaccggcacgagcagctggagcgg
gtcctgccgccgctgatgagcatgatctcgacgctgctcgaagccagtctgccgtcgcgc
gtcatcgccctggagctggaggagagcggggcgaaccgctggaaggtttcgctccacgac
cccaggctgcgcgagccggacggcgccgacttctacctttccgtccgctcgcgactctcc
gccgcgcagctgcagagtcagtttccccacctgtgcaaggtggggaccccggatgacgtc
gatcacctggtcaacgcggcgctggacggcatcccgctgcaaccgctcaaccatgtcccc
gctgccatcccgttgcgcctggagaaccagtatttcgcgctggatctcgggcatcccaag
gggcgggccatgctcgccgccggtgtgtgcgccttctatgttcccgccacgctgatcgac
gcccggctcgaactgttcgcggtactgcgctcatga
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