KEGG   Pseudomonas solani: PSm6_35290
Entry
PSm6_35290        CDS       T09213                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
psoa  Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:psoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psoa03400]
    PSm6_35290
Enzymes [BR:psoa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PSm6_35290
    5.6.2.6  RNA 3'-5' helicase
     PSm6_35290
DNA repair and recombination proteins [BR:psoa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PSm6_35290
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII AAA_25
Other DBs
NCBI-ProteinID: BCD87122
LinkDB
Position
complement(3843143..3845638)
AA seq 831 aa
MSRAPRPSSRWFGDRGWRPFVFQKSLWRAVAQGRSGLLHATTGAGKTYAAWFAALDLLTG
ATPTRKERGKGQVLPLSVLWITPMRALAADTARALQAPIDELGLPWSLGLRTGDTGSAER
ARQSRNLPSVLVTTPESLTLLLTRADAAQAFAGLRMVVVDEWHELLGNKRGVQLQLALAR
LRLWNPALATWGLSATLGNLEHALQVLVPGGDGLLLQGEQRKRLEVDTLLPASVERFPWA
GHMGLRMLPQVVAELEGSASSLVFTNTRAQSETWYQALLAARPDWAGLIALHHGSLSREV
REWVENGLKQGRLKAVVCTSSLDLGVDFLPVERVLQVGTAKGVARLMQRAGRSGHAPGRA
SRVTLVPTHSLELVEAVAARQAIAERRIEARLSPEKPLDVLVQHLVSMALGGGFQAEAML
AEVRSCWAYRALGDDEWAWALAFIRHGGHSLTAYPEYRRAEPDASGLWQVPSAQLARRHR
QSIGTIVSDASLQVRFWGKGGAAGSLGSIEEGFISRLRPGDAFLFAGRPLELVRVEDMTA
YVRRSAARKAAIPRWNGGRMPLSSELADALVHQLGEAARGRYDSPELKLTRPLLELQQAW
SALPDEHNLLAECLKSREGWHLFLYPFAGRQVHLGLASLLAWRLARQSPVSFSIAVNDYG
LELLAATEVDWAACLGPELFSEHELLEDLLHSLNASELSRRRFREIARIAGLVFAGRPGA
SKSTRQLQASSGLFFDVFRQYDPDNLLLHQAREEVLRQELDLPRLEACLQRIRERELRLV
EVPRPTPLAFPLLVERFREGLSSEKLADRIARMVKQLERAADQPPRRSRAR
NT seq 2496 nt   +upstreamnt  +downstreamnt
ttgagccgcgccccccgcccctcctcgcgctggttcggcgaccgtggctggcgccccttc
gtcttccagaaaagcctctggcgcgccgtcgcccagggccgctccggcctgctccacgcc
accaccggcgccggcaagacctacgccgcctggttcgccgccctcgatttgctgaccggc
gccacgcccacccgcaaggagcgtggcaagggccaggtgctgccgctctcggtactgtgg
ataacccccatgcgcgccctggccgccgacaccgcccgcgccctgcaggcgcccatcgac
gaactcggcctgccctggagcctgggcctgcgcacgggcgataccggcagcgccgagcgc
gcccggcaatcgcgcaacctgcccagcgtgctggtcaccacgccggaaagcctgaccctg
ctgctgacccgcgccgacgccgcccaagccttcgccgggctgcgcatggtagtggtcgac
gaatggcacgagctgctcggcaacaagcgcggcgtgcaactgcaactggccctggcacgg
ctgcgcctgtggaaccccgcgctcgccacctggggcctgtccgccaccctgggcaacctg
gagcacgcgctgcaggtactggtgcccggcggcgacggcctgctgctgcagggcgagcag
cgcaagcgcctggaggtggacaccctgctgccggccagcgtcgagcgtttcccctgggcc
gggcacatgggattgcgcatgctgccgcaggtggtggcagagctggagggcagcgccagc
agcctggtgttcaccaacacccgcgcgcagtcggaaacctggtaccaggccctgctcgcc
gcacgaccggactgggccgggctgatcgccctgcaccacggctcgctgtcccgcgaggtg
cgcgaatgggtggagaacggcctcaagcagggccgcctcaaggccgtggtgtgcacctcc
agcctcgacctgggggtggacttcctccccgtggagcgggtgctgcaggtgggcaccgcc
aagggcgtggcgcggctgatgcaacgggctggccgctccggccacgcgccgggccgcgcc
tcgcgggtgaccctggtgcccacccacagcctggaactggtggaggcggtggccgcgcgc
caggccatcgccgagcgccgcatcgaagcacgcctgagcccggaaaagccgctggacgtg
ctggtccagcacctggtcagcatggccctcggcggtggcttccaggccgaggcgatgctc
gccgaggtgcgcagttgctgggcctatcgcgccctgggggatgacgaatgggcctgggcc
ctggccttcatccgccacggcggccattccctcaccgcctaccccgagtaccgccgcgcc
gaacccgatgccagcggcttatggcaggtgcccagtgcgcagctggcgcggcggcaccgg
cagagcatcggcaccatcgtcagcgacgccagcctgcaggtgcgcttctggggcaagggc
ggtgccgccggctccctgggcagcatcgaggaaggcttcatctcgcgcctgcgcccgggc
gatgccttcctcttcgccggccgcccactggagctggtgcgggtcgaggacatgaccgcc
tacgtgcgccgcagcgccgcgcgcaaggccgccatcccgcgctggaacggtgggcgcatg
cccctttccagcgaactggccgatgccctggtgcaccagctgggcgaggccgcgcggggc
cgctacgacagccccgagctgaaactgacccggccgctgctggaactgcagcaggcctgg
tcggcgctgcccgacgagcacaacctgctggccgagtgcctgaagagccgcgagggctgg
cacctgttcctctaccccttcgccggccgccaggtgcacctgggcctcgccagcctgctg
gcctggcgcctggcccggcaaagccccgtgagcttctccatcgccgtcaacgactacggc
ctggagctgctggcagccaccgaggtggattgggccgcatgcctgggtcccgagctgttc
agcgagcacgaactgctcgaggacctgctgcacagcctcaatgccagcgagctgtcacgc
cggcgcttccgcgagatcgcccgcatcgccgggctggtgttcgccggccgccccggtgcc
agcaagagcacccgccagctgcaggcctccagcgggctgttcttcgacgtgttccgccag
tacgacccggacaacctgctgctgcaccaggcccgcgaggaggtgctgcgccaggagctg
gacctgccgcgcctggaggcctgcctgcaacgcatccgcgagcgcgagctgcgcctggtg
gaggtgccgcgccccacgcccctggccttcccgctgctggtggaacgcttccgcgaaggg
ctgagcagcgagaagctggccgaccgcatcgcccgcatggtgaagcagctggagcgcgcc
gccgaccagccgccacgccggagccgggcgcgatga

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