KEGG   Pseudomonas solani: PSm6_38320
Entry
PSm6_38320        CDS       T09213                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
psoa  Pseudomonas solani
Pathway
psoa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psoa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSm6_38320
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psoa02044]
    PSm6_38320
Secretion system [BR:psoa02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSm6_38320
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V Sarcoglycan_1 SLS DUF3540 MscS_porin
Other DBs
NCBI-ProteinID: BCD87425
LinkDB
Position
4183330..4185708
AA seq 792 aa
MLAELRHFFDHSRHRLQVGELDVGLDVLAFVGDETLSQPFTYQVEFTSSQRDLPSRRIVG
QPASFSLFAPPAPVPFAGLGVPPAQPLRTLHGVITGFRRISGSNDEARYEITLQPRLTLL
GRGRQYRIYQHLSVPEIVEQILRSDRHRWAGQDFFFDLRRDYPKREQVMQYDESDLAFIQ
RLLAEVGIWYRFTADERLGIDVVEFHDDQRNYRFGVQLPYRPPSGTVSSGQDAVWDLQTS
HGVVERNLRIRAYTPRDATAYLDGDLDQTRGDPTTYGEAYHYGDPYIELDDPGSRDEDLK
SESGYFYARLAHERYLNDQTRLDGRTSSATLAPGQVLKIEGGAPEAFTPGAVITRLVTVA
ARDRSFEARFEAIPYSESVCFRPPLLPRPVIAGTIPARVTSAQADDLYSHIDLEGRYKVN
FLFDQDTWPAGQESMWLRLARAYAGDTHGLHLPLIQGTEVGIAFERGDPDRGFIAFALHD
SRHPDLVTLKNYKRNVLRTPSNNKLRLDDTRGQEHIKLSTEHSGKSQLNLGHLVDGQRQK
RGEGFELRTDGWGALRSGKGMFISADEQPRAQGQVLAMQDTLARLQRAAEEMQTLSEDAQ
VANAEPADVQAQLDLLRQDLEQIKSAVLLLSAPKGIALSSGHHLQLAAERNLIANAGKDA
ALSVVRRLFIGVGEGVSLFVRKLGLKLIANQGAVQIQAQNDRLELLARQGLEITSTEDEI
HITAKKRIVLNAGGSYISVDACSIESGTQGDHLIKAAHFDYQGAASNSPPLPELPQLTEY
QRRHQRLTGFSG
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgcttgccgaactccgccatttcttcgatcacagccgtcaccgcctgcaggtgggcgaa
ctcgacgtcgggctcgacgtcctcgccttcgtcggggacgagacgctcagccagcccttc
acctaccaggtcgagttcacctcgtcccagcgcgacctcccctccaggcgcatcgtcggg
cagcccgccagcttcagcctcttcgcgccccccgcaccggtgcccttcgccggcctgggc
gtgccgccggcccagccgctgcgcaccctgcacggcgtgatcacgggcttccggcggatc
tccggctccaacgacgaggcccgctacgaaatcaccctgcagccgcgcctgaccctgctc
gggcggggccggcagtaccgcatctaccagcacctctcggtgcccgagatcgtcgagcag
atcctgcgcagcgaccgccaccgctgggccgggcaggacttcttcttcgacctcaggcgc
gactaccccaagcgcgagcaggtcatgcaatacgacgagagcgacctggccttcatccag
cgcctgctggccgaggtgggcatctggtaccgcttcaccgccgacgagcgcctgggcatc
gatgtcgtcgagttccacgatgaccagcgcaactaccggttcggcgtccagctgccctac
cgcccgccgtccggcaccgtcagcagcggccaggacgccgtctgggacctgcagacgagc
cacggtgtggtggaaaggaacctgcgcatccgcgcctacaccccgcgtgacgcaacggcc
tacctcgacggcgacctcgaccagacccggggcgacccgaccacctacggcgaggcctat
cactacggcgatccctacattgagctggacgaccccggctcccgcgacgaagacctgaaa
agcgaaagcggctacttctatgcccgcctcgcccacgagcgctacctcaacgaccagacc
cgcctcgacggccgcaccagcagcgccaccctggcacctgggcaggtgctgaagatcgag
ggcggcgcgcccgaggccttcacccctggcgccgtcatcacccgcctggtcaccgtcgcc
gcccgcgatcgcagcttcgaagcccgcttcgaggccatcccctacagcgaaagcgtgtgc
tttcgcccgccgctgctgccgcgccccgtgatcgccggcaccatcccggcccgtgtcacc
agcgcgcaggccgacgacctctacagccacatcgacctggagggccgctacaaggtcaac
ttcctcttcgaccaggacacctggcccgccggccaggaaagcatgtggctgcgcctggca
cgcgcctatgccggggatacccacggcctgcacctgccgctgatccagggcaccgaggtg
ggcatcgccttcgagcgcggcgacccggaccggggcttcatcgccttcgccctgcacgac
agccggcaccccgacctcgtcaccctgaagaactacaagcgcaacgtcctgcgcaccccg
tccaacaacaagctgcgcctggacgacacccgtggccaggaacacatcaagctcagcacc
gagcacagcggcaagagccagctcaacctcggccacctggtggatgggcagcggcagaaa
cgcggcgaaggcttcgagctgcgcaccgacggctggggcgcgctgcgttccggcaagggc
atgttcatcagtgccgatgaacagccgcgtgcccaggggcaggtgctggccatgcaggac
acgctcgcccgcctgcaacgcgccgctgaggagatgcagacgctttccgaggatgcccag
gtcgccaacgccgagccggccgatgtgcaggcgcagctcgacctgctcaggcaggacctg
gagcagatcaagtccgccgtcctgctgctcagtgcacccaagggcatcgcgctcagcagt
ggccaccacctgcaactggccgcagaacggaacctcatcgccaacgcgggcaaggacgcc
gccttgagcgtggtgcggcggctgttcatcggcgtgggggagggcgtcagcctgttcgtg
cgcaagctcggcctgaagctcatcgccaaccagggcgcggtgcagatccaggcgcagaac
gaccgcctggaactgctggcccgccaggggctggagatcaccagcaccgaggatgaaatc
cacatcaccgccaagaagaggatcgtcctcaacgctggcggcagctacatcagcgtcgat
gcctgttccatcgaatcgggcacccagggggaccacctgatcaaggcagcgcatttcgat
taccagggggcggccagcaactctccaccgttaccggaactgccccaactcaccgagtac
cagcgtcgccatcagcgcctaacaggcttttcgggctag

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