Pseudomonas solani: PSm6_48460
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Entry
PSm6_48460 CDS
T09213
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
psoa
Pseudomonas solani
Pathway
psoa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PSm6_48460 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoa03400
]
PSm6_48460 (ku)
DNA repair and recombination proteins [BR:
psoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PSm6_48460 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Tom5
DDRGK
Motif
Other DBs
NCBI-ProteinID:
BCD88439
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All DBs
Position
5258966..5259847
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AA seq
293 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVGLVSATSSQGVDFDWLDKRNMDPVGYKRVNKRTGKEVAKDD
IVKGVALEKGRYVVISEEEIRAAHPEATQTIDIFAFVDSAAIPLQNIDTPYYLAPVKRGE
KVYALLREALSGTAKVALANVVLHTRQHLAAVMPLESALVLVMLRWPAEVRGLDSLELGS
AVTDAKLAKAELDMAKRLIKDMSADWQPDEYVDSFTDRIMELVERKASQGRIEAVESPAG
EEERRSADVIDLTDLLKRSLGGKPASKAKPAKAAAKPARKSSAKPSRSKAKAG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgcgatctggaagggcgctatcagcttcggcctggtgcacatcccggtgggc
ctggtttcggccacctcgtcccagggcgtggacttcgactggctggacaagcgcaacatg
gacccggtgggctacaagcgggtcaacaagcgcaccggcaaggaagtggccaaggacgat
atcgtcaagggcgtggcgctggagaagggccgctatgtggtgatcagcgaggaggaaatc
cgcgccgcccaccccgaggcgacccagaccatcgatatcttcgccttcgtcgacagcgcc
gctatccccctgcagaacatcgataccccctactacctggcaccggtcaaacgcggcgag
aaggtctacgccttgttgcgcgaggcgctctcgggcaccgcgaaggtggccctggccaat
gtggtgctgcacacccgccagcacctggcggcggtgatgccgctggagtccgcgctggtg
ctggtgatgctgcgctggcccgcggaggtacgcgggctggacagcctggagctgggcagc
gcggtgaccgacgccaagctggccaaggccgagctggacatggccaagcggctgatcaag
gacatgagcgccgactggcagccggacgagtacgtcgacagcttcaccgaccgcatcatg
gaactggtggagcgcaaggccagccagggccgcatcgaggcggtggagtcgccagcgggc
gaggaggagcggcgcagcgccgatgtcatcgaccttaccgatctgctcaagcgcagcctc
ggcggcaagcccgccagcaaggccaagccggcgaaggcggccgccaaaccggcgcgcaag
agcagcgccaagccatcacggagcaaggccaaggctggctga
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